Cargando…

Comparative Analysis of Mouse Decidualization Models at the Molecular Level

The mouse is widely used to study decidualization and there are three well-established mouse models of decidualization, namely natural pregnancy decidualization (NPD), artificial decidualization (AD), and in vitro decidualization (IVD). However, the extent of similarity and difference between these...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Chong, Zhao, Miao, Zhang, Wen-Qian, Huang, Ming-Yu, Zhu, Can, He, Jia-Peng, Liu, Ji-Long
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7465532/
https://www.ncbi.nlm.nih.gov/pubmed/32823685
http://dx.doi.org/10.3390/genes11080935
_version_ 1783577608854700032
author Wang, Chong
Zhao, Miao
Zhang, Wen-Qian
Huang, Ming-Yu
Zhu, Can
He, Jia-Peng
Liu, Ji-Long
author_facet Wang, Chong
Zhao, Miao
Zhang, Wen-Qian
Huang, Ming-Yu
Zhu, Can
He, Jia-Peng
Liu, Ji-Long
author_sort Wang, Chong
collection PubMed
description The mouse is widely used to study decidualization and there are three well-established mouse models of decidualization, namely natural pregnancy decidualization (NPD), artificial decidualization (AD), and in vitro decidualization (IVD). However, the extent of similarity and difference between these models at the molecular level remains largely unknown. Here, we performed a comparative analysis using the RNA-seq approach. In the NPD model, which is thought to be the golden standard of mouse decidualization, we found a total of 5277 differentially expressed genes, with 3158 genes being up-regulated and 2119 genes being down-regulated. A total of 4294 differentially expressed genes were identified in the AD model: 1127 up-regulated genes and 3167 down-regulated genes. In comparison to NPD, 1977 genes were consistently expressed, whereas only 217 genes were inconsistently expressed, indicating that AD is a reliable model for mouse decidualization. In the IVD model, RNA-seq analysis revealed that 513 genes were up-regulated and 988 genes were down-regulated. Compared to NPD, 310 genes were consistently expressed, whereas 456 genes were inconsistently expressed. Moreover, although the decidualization marker Prl8a2 (prolactin family 8 subfamily a member 2) was up-regulated, the widely-used marker Alpl (alkaline phosphatase liver/bone/kidney) was down-regulated in the IVD model. Therefore, we suggest that the IVD model should be optimized to mimic NPD at the transcriptomic level. Our study contributes to an increase in the knowledge about mouse models of decidualization.
format Online
Article
Text
id pubmed-7465532
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-74655322020-09-04 Comparative Analysis of Mouse Decidualization Models at the Molecular Level Wang, Chong Zhao, Miao Zhang, Wen-Qian Huang, Ming-Yu Zhu, Can He, Jia-Peng Liu, Ji-Long Genes (Basel) Article The mouse is widely used to study decidualization and there are three well-established mouse models of decidualization, namely natural pregnancy decidualization (NPD), artificial decidualization (AD), and in vitro decidualization (IVD). However, the extent of similarity and difference between these models at the molecular level remains largely unknown. Here, we performed a comparative analysis using the RNA-seq approach. In the NPD model, which is thought to be the golden standard of mouse decidualization, we found a total of 5277 differentially expressed genes, with 3158 genes being up-regulated and 2119 genes being down-regulated. A total of 4294 differentially expressed genes were identified in the AD model: 1127 up-regulated genes and 3167 down-regulated genes. In comparison to NPD, 1977 genes were consistently expressed, whereas only 217 genes were inconsistently expressed, indicating that AD is a reliable model for mouse decidualization. In the IVD model, RNA-seq analysis revealed that 513 genes were up-regulated and 988 genes were down-regulated. Compared to NPD, 310 genes were consistently expressed, whereas 456 genes were inconsistently expressed. Moreover, although the decidualization marker Prl8a2 (prolactin family 8 subfamily a member 2) was up-regulated, the widely-used marker Alpl (alkaline phosphatase liver/bone/kidney) was down-regulated in the IVD model. Therefore, we suggest that the IVD model should be optimized to mimic NPD at the transcriptomic level. Our study contributes to an increase in the knowledge about mouse models of decidualization. MDPI 2020-08-13 /pmc/articles/PMC7465532/ /pubmed/32823685 http://dx.doi.org/10.3390/genes11080935 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wang, Chong
Zhao, Miao
Zhang, Wen-Qian
Huang, Ming-Yu
Zhu, Can
He, Jia-Peng
Liu, Ji-Long
Comparative Analysis of Mouse Decidualization Models at the Molecular Level
title Comparative Analysis of Mouse Decidualization Models at the Molecular Level
title_full Comparative Analysis of Mouse Decidualization Models at the Molecular Level
title_fullStr Comparative Analysis of Mouse Decidualization Models at the Molecular Level
title_full_unstemmed Comparative Analysis of Mouse Decidualization Models at the Molecular Level
title_short Comparative Analysis of Mouse Decidualization Models at the Molecular Level
title_sort comparative analysis of mouse decidualization models at the molecular level
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7465532/
https://www.ncbi.nlm.nih.gov/pubmed/32823685
http://dx.doi.org/10.3390/genes11080935
work_keys_str_mv AT wangchong comparativeanalysisofmousedecidualizationmodelsatthemolecularlevel
AT zhaomiao comparativeanalysisofmousedecidualizationmodelsatthemolecularlevel
AT zhangwenqian comparativeanalysisofmousedecidualizationmodelsatthemolecularlevel
AT huangmingyu comparativeanalysisofmousedecidualizationmodelsatthemolecularlevel
AT zhucan comparativeanalysisofmousedecidualizationmodelsatthemolecularlevel
AT hejiapeng comparativeanalysisofmousedecidualizationmodelsatthemolecularlevel
AT liujilong comparativeanalysisofmousedecidualizationmodelsatthemolecularlevel