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Comparative Analysis of Mouse Decidualization Models at the Molecular Level
The mouse is widely used to study decidualization and there are three well-established mouse models of decidualization, namely natural pregnancy decidualization (NPD), artificial decidualization (AD), and in vitro decidualization (IVD). However, the extent of similarity and difference between these...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7465532/ https://www.ncbi.nlm.nih.gov/pubmed/32823685 http://dx.doi.org/10.3390/genes11080935 |
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author | Wang, Chong Zhao, Miao Zhang, Wen-Qian Huang, Ming-Yu Zhu, Can He, Jia-Peng Liu, Ji-Long |
author_facet | Wang, Chong Zhao, Miao Zhang, Wen-Qian Huang, Ming-Yu Zhu, Can He, Jia-Peng Liu, Ji-Long |
author_sort | Wang, Chong |
collection | PubMed |
description | The mouse is widely used to study decidualization and there are three well-established mouse models of decidualization, namely natural pregnancy decidualization (NPD), artificial decidualization (AD), and in vitro decidualization (IVD). However, the extent of similarity and difference between these models at the molecular level remains largely unknown. Here, we performed a comparative analysis using the RNA-seq approach. In the NPD model, which is thought to be the golden standard of mouse decidualization, we found a total of 5277 differentially expressed genes, with 3158 genes being up-regulated and 2119 genes being down-regulated. A total of 4294 differentially expressed genes were identified in the AD model: 1127 up-regulated genes and 3167 down-regulated genes. In comparison to NPD, 1977 genes were consistently expressed, whereas only 217 genes were inconsistently expressed, indicating that AD is a reliable model for mouse decidualization. In the IVD model, RNA-seq analysis revealed that 513 genes were up-regulated and 988 genes were down-regulated. Compared to NPD, 310 genes were consistently expressed, whereas 456 genes were inconsistently expressed. Moreover, although the decidualization marker Prl8a2 (prolactin family 8 subfamily a member 2) was up-regulated, the widely-used marker Alpl (alkaline phosphatase liver/bone/kidney) was down-regulated in the IVD model. Therefore, we suggest that the IVD model should be optimized to mimic NPD at the transcriptomic level. Our study contributes to an increase in the knowledge about mouse models of decidualization. |
format | Online Article Text |
id | pubmed-7465532 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-74655322020-09-04 Comparative Analysis of Mouse Decidualization Models at the Molecular Level Wang, Chong Zhao, Miao Zhang, Wen-Qian Huang, Ming-Yu Zhu, Can He, Jia-Peng Liu, Ji-Long Genes (Basel) Article The mouse is widely used to study decidualization and there are three well-established mouse models of decidualization, namely natural pregnancy decidualization (NPD), artificial decidualization (AD), and in vitro decidualization (IVD). However, the extent of similarity and difference between these models at the molecular level remains largely unknown. Here, we performed a comparative analysis using the RNA-seq approach. In the NPD model, which is thought to be the golden standard of mouse decidualization, we found a total of 5277 differentially expressed genes, with 3158 genes being up-regulated and 2119 genes being down-regulated. A total of 4294 differentially expressed genes were identified in the AD model: 1127 up-regulated genes and 3167 down-regulated genes. In comparison to NPD, 1977 genes were consistently expressed, whereas only 217 genes were inconsistently expressed, indicating that AD is a reliable model for mouse decidualization. In the IVD model, RNA-seq analysis revealed that 513 genes were up-regulated and 988 genes were down-regulated. Compared to NPD, 310 genes were consistently expressed, whereas 456 genes were inconsistently expressed. Moreover, although the decidualization marker Prl8a2 (prolactin family 8 subfamily a member 2) was up-regulated, the widely-used marker Alpl (alkaline phosphatase liver/bone/kidney) was down-regulated in the IVD model. Therefore, we suggest that the IVD model should be optimized to mimic NPD at the transcriptomic level. Our study contributes to an increase in the knowledge about mouse models of decidualization. MDPI 2020-08-13 /pmc/articles/PMC7465532/ /pubmed/32823685 http://dx.doi.org/10.3390/genes11080935 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Wang, Chong Zhao, Miao Zhang, Wen-Qian Huang, Ming-Yu Zhu, Can He, Jia-Peng Liu, Ji-Long Comparative Analysis of Mouse Decidualization Models at the Molecular Level |
title | Comparative Analysis of Mouse Decidualization Models at the Molecular Level |
title_full | Comparative Analysis of Mouse Decidualization Models at the Molecular Level |
title_fullStr | Comparative Analysis of Mouse Decidualization Models at the Molecular Level |
title_full_unstemmed | Comparative Analysis of Mouse Decidualization Models at the Molecular Level |
title_short | Comparative Analysis of Mouse Decidualization Models at the Molecular Level |
title_sort | comparative analysis of mouse decidualization models at the molecular level |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7465532/ https://www.ncbi.nlm.nih.gov/pubmed/32823685 http://dx.doi.org/10.3390/genes11080935 |
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