Cargando…

A Shallow Water Ferrous-Hulled Shipwreck Reveals a Distinct Microbial Community

Shipwrecks act as artificial reefs and provide a solid surface in aquatic systems for many different forms of life to attach to, especially microbial communities, making them a hotspot of biogeochemical cycling. Depending on the microbial community and surrounding environment, they may either contri...

Descripción completa

Detalles Bibliográficos
Autores principales: Price, Kyra A., Garrison, Cody E., Richards, Nathan, Field, Erin K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7466744/
https://www.ncbi.nlm.nih.gov/pubmed/32973699
http://dx.doi.org/10.3389/fmicb.2020.01897
_version_ 1783577883636137984
author Price, Kyra A.
Garrison, Cody E.
Richards, Nathan
Field, Erin K.
author_facet Price, Kyra A.
Garrison, Cody E.
Richards, Nathan
Field, Erin K.
author_sort Price, Kyra A.
collection PubMed
description Shipwrecks act as artificial reefs and provide a solid surface in aquatic systems for many different forms of life to attach to, especially microbial communities, making them a hotspot of biogeochemical cycling. Depending on the microbial community and surrounding environment, they may either contribute to the wreck’s preservation or deterioration. Even within a single wreck, preservation and deterioration processes may vary, suggesting that the microbial community may also vary. This study aimed to identify the differences through widespread sampling of the microbial communities associated with the Pappy Lane shipwreck (NC shipwreck site #PAS0001), a shallow water ferrous-hulled shipwreck in Pamlico Sound, North Carolina to determine if there are differences across the wreck as well as from its surrounding environment. Loose shipwreck debris, drilled shipcores, surrounding sediment, and seawater samples were collected from the Pappy Lane shipwreck to characterize the microbial communities on and around the shipwreck. Results indicated that the shipwreck samples were more similar to each other than the surrounding sediment and aquatic environments suggesting they have made a specialized niche associated with the shipwreck. There were differences between the microbial community across the shipwreck, including between visibly corroded and non-corroded shipwreck debris pieces. Relative abundance estimates for neutrophilic iron-oxidizing bacteria (FeOB), an organism that may contribute to deterioration through biocorrosion, revealed they are present across the shipwreck and at highest abundance on the samples containing visible corrosion products. Zetaproteobacteria, a known class of marine iron-oxidizers, were also found in higher abundance on shipwreck samples with visible corrosion. A novel Zetaproteobacteria strain, Mariprofundus ferrooxydans O1, was isolated from one of the shipwreck pieces and its genome analyzed to elucidate the functional potential of the organism. In addition to iron oxidation pathways, the isolate has the genomic potential to perform carbon fixation in both high and low oxygen environments, as well as perform nitrogen fixation, contributing to the overall biogeochemical cycling of nutrients and metals in the shipwreck ecosystem. By understanding the microbial communities associated with shallow water ferrous-hulled shipwrecks, better management strategies and preservation plans can be put into place to preserve these artificial reefs and non-renewable cultural resources.
format Online
Article
Text
id pubmed-7466744
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-74667442020-09-23 A Shallow Water Ferrous-Hulled Shipwreck Reveals a Distinct Microbial Community Price, Kyra A. Garrison, Cody E. Richards, Nathan Field, Erin K. Front Microbiol Microbiology Shipwrecks act as artificial reefs and provide a solid surface in aquatic systems for many different forms of life to attach to, especially microbial communities, making them a hotspot of biogeochemical cycling. Depending on the microbial community and surrounding environment, they may either contribute to the wreck’s preservation or deterioration. Even within a single wreck, preservation and deterioration processes may vary, suggesting that the microbial community may also vary. This study aimed to identify the differences through widespread sampling of the microbial communities associated with the Pappy Lane shipwreck (NC shipwreck site #PAS0001), a shallow water ferrous-hulled shipwreck in Pamlico Sound, North Carolina to determine if there are differences across the wreck as well as from its surrounding environment. Loose shipwreck debris, drilled shipcores, surrounding sediment, and seawater samples were collected from the Pappy Lane shipwreck to characterize the microbial communities on and around the shipwreck. Results indicated that the shipwreck samples were more similar to each other than the surrounding sediment and aquatic environments suggesting they have made a specialized niche associated with the shipwreck. There were differences between the microbial community across the shipwreck, including between visibly corroded and non-corroded shipwreck debris pieces. Relative abundance estimates for neutrophilic iron-oxidizing bacteria (FeOB), an organism that may contribute to deterioration through biocorrosion, revealed they are present across the shipwreck and at highest abundance on the samples containing visible corrosion products. Zetaproteobacteria, a known class of marine iron-oxidizers, were also found in higher abundance on shipwreck samples with visible corrosion. A novel Zetaproteobacteria strain, Mariprofundus ferrooxydans O1, was isolated from one of the shipwreck pieces and its genome analyzed to elucidate the functional potential of the organism. In addition to iron oxidation pathways, the isolate has the genomic potential to perform carbon fixation in both high and low oxygen environments, as well as perform nitrogen fixation, contributing to the overall biogeochemical cycling of nutrients and metals in the shipwreck ecosystem. By understanding the microbial communities associated with shallow water ferrous-hulled shipwrecks, better management strategies and preservation plans can be put into place to preserve these artificial reefs and non-renewable cultural resources. Frontiers Media S.A. 2020-08-19 /pmc/articles/PMC7466744/ /pubmed/32973699 http://dx.doi.org/10.3389/fmicb.2020.01897 Text en Copyright © 2020 Price, Garrison, Richards and Field. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Price, Kyra A.
Garrison, Cody E.
Richards, Nathan
Field, Erin K.
A Shallow Water Ferrous-Hulled Shipwreck Reveals a Distinct Microbial Community
title A Shallow Water Ferrous-Hulled Shipwreck Reveals a Distinct Microbial Community
title_full A Shallow Water Ferrous-Hulled Shipwreck Reveals a Distinct Microbial Community
title_fullStr A Shallow Water Ferrous-Hulled Shipwreck Reveals a Distinct Microbial Community
title_full_unstemmed A Shallow Water Ferrous-Hulled Shipwreck Reveals a Distinct Microbial Community
title_short A Shallow Water Ferrous-Hulled Shipwreck Reveals a Distinct Microbial Community
title_sort shallow water ferrous-hulled shipwreck reveals a distinct microbial community
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7466744/
https://www.ncbi.nlm.nih.gov/pubmed/32973699
http://dx.doi.org/10.3389/fmicb.2020.01897
work_keys_str_mv AT pricekyraa ashallowwaterferroushulledshipwreckrevealsadistinctmicrobialcommunity
AT garrisoncodye ashallowwaterferroushulledshipwreckrevealsadistinctmicrobialcommunity
AT richardsnathan ashallowwaterferroushulledshipwreckrevealsadistinctmicrobialcommunity
AT fielderink ashallowwaterferroushulledshipwreckrevealsadistinctmicrobialcommunity
AT pricekyraa shallowwaterferroushulledshipwreckrevealsadistinctmicrobialcommunity
AT garrisoncodye shallowwaterferroushulledshipwreckrevealsadistinctmicrobialcommunity
AT richardsnathan shallowwaterferroushulledshipwreckrevealsadistinctmicrobialcommunity
AT fielderink shallowwaterferroushulledshipwreckrevealsadistinctmicrobialcommunity