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A deep learning approach in diagnosing fungal keratitis based on corneal photographs

Fungal keratitis (FK) is the most devastating and vision-threatening microbial keratitis, but clinical diagnosis a great challenge. This study aimed to develop and verify a deep learning (DL)-based corneal photograph model for diagnosing FK. Corneal photos of laboratory-confirmed microbial keratitis...

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Autores principales: Kuo, Ming-Tse, Hsu, Benny Wei-Yun, Yin, Yu-Kai, Fang, Po-Chiung, Lai, Hung-Yin, Chen, Alexander, Yu, Meng-Shan, Tseng, Vincent S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7468230/
https://www.ncbi.nlm.nih.gov/pubmed/32879364
http://dx.doi.org/10.1038/s41598-020-71425-9
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author Kuo, Ming-Tse
Hsu, Benny Wei-Yun
Yin, Yu-Kai
Fang, Po-Chiung
Lai, Hung-Yin
Chen, Alexander
Yu, Meng-Shan
Tseng, Vincent S.
author_facet Kuo, Ming-Tse
Hsu, Benny Wei-Yun
Yin, Yu-Kai
Fang, Po-Chiung
Lai, Hung-Yin
Chen, Alexander
Yu, Meng-Shan
Tseng, Vincent S.
author_sort Kuo, Ming-Tse
collection PubMed
description Fungal keratitis (FK) is the most devastating and vision-threatening microbial keratitis, but clinical diagnosis a great challenge. This study aimed to develop and verify a deep learning (DL)-based corneal photograph model for diagnosing FK. Corneal photos of laboratory-confirmed microbial keratitis were consecutively collected from a single referral center. A DL framework with DenseNet architecture was used to automatically recognize FK from the photo. The diagnoses of FK via corneal photograph for comparing DL-based models were made in the Expert and NCS-Oph group through a majority decision of three non-corneal specialty ophthalmologist and three corneal specialists, respectively. The average percentage of sensitivity, specificity, positive predictive value, and negative predictive value was approximately 71, 68, 60, and 78. The sensitivity was higher than that of the NCS-Oph (52%, P < .01), whereas the specificity was lower than that of the NCS-Oph (83%, P < .01). The average accuracy of around 70% was comparable with that of the NCS-Oph. Therefore, the sensitive DL-based diagnostic model is a promising tool for improving first-line medical care at rural area in early identification of FK.
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spelling pubmed-74682302020-09-04 A deep learning approach in diagnosing fungal keratitis based on corneal photographs Kuo, Ming-Tse Hsu, Benny Wei-Yun Yin, Yu-Kai Fang, Po-Chiung Lai, Hung-Yin Chen, Alexander Yu, Meng-Shan Tseng, Vincent S. Sci Rep Article Fungal keratitis (FK) is the most devastating and vision-threatening microbial keratitis, but clinical diagnosis a great challenge. This study aimed to develop and verify a deep learning (DL)-based corneal photograph model for diagnosing FK. Corneal photos of laboratory-confirmed microbial keratitis were consecutively collected from a single referral center. A DL framework with DenseNet architecture was used to automatically recognize FK from the photo. The diagnoses of FK via corneal photograph for comparing DL-based models were made in the Expert and NCS-Oph group through a majority decision of three non-corneal specialty ophthalmologist and three corneal specialists, respectively. The average percentage of sensitivity, specificity, positive predictive value, and negative predictive value was approximately 71, 68, 60, and 78. The sensitivity was higher than that of the NCS-Oph (52%, P < .01), whereas the specificity was lower than that of the NCS-Oph (83%, P < .01). The average accuracy of around 70% was comparable with that of the NCS-Oph. Therefore, the sensitive DL-based diagnostic model is a promising tool for improving first-line medical care at rural area in early identification of FK. Nature Publishing Group UK 2020-09-02 /pmc/articles/PMC7468230/ /pubmed/32879364 http://dx.doi.org/10.1038/s41598-020-71425-9 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kuo, Ming-Tse
Hsu, Benny Wei-Yun
Yin, Yu-Kai
Fang, Po-Chiung
Lai, Hung-Yin
Chen, Alexander
Yu, Meng-Shan
Tseng, Vincent S.
A deep learning approach in diagnosing fungal keratitis based on corneal photographs
title A deep learning approach in diagnosing fungal keratitis based on corneal photographs
title_full A deep learning approach in diagnosing fungal keratitis based on corneal photographs
title_fullStr A deep learning approach in diagnosing fungal keratitis based on corneal photographs
title_full_unstemmed A deep learning approach in diagnosing fungal keratitis based on corneal photographs
title_short A deep learning approach in diagnosing fungal keratitis based on corneal photographs
title_sort deep learning approach in diagnosing fungal keratitis based on corneal photographs
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7468230/
https://www.ncbi.nlm.nih.gov/pubmed/32879364
http://dx.doi.org/10.1038/s41598-020-71425-9
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