Cargando…
The mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing
BACKGROUND: Congenital cataract (CC) is a significant cause of lifelong visual loss, and its genetic diagnosis is challenging due to marked genetic heterogeneity. The purpose of this article is to report the genetic findings in sporadic and familial CC patients. METHODS: Patients (n = 53) who were c...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7469093/ https://www.ncbi.nlm.nih.gov/pubmed/32883240 http://dx.doi.org/10.1186/s12886-020-01567-x |
_version_ | 1783578356084637696 |
---|---|
author | Fan, Fan Luo, Yi Wu, Jihong Gao, Chao Liu, Xin Mei, Hengjun Zhou, Xiyue |
author_facet | Fan, Fan Luo, Yi Wu, Jihong Gao, Chao Liu, Xin Mei, Hengjun Zhou, Xiyue |
author_sort | Fan, Fan |
collection | PubMed |
description | BACKGROUND: Congenital cataract (CC) is a significant cause of lifelong visual loss, and its genetic diagnosis is challenging due to marked genetic heterogeneity. The purpose of this article is to report the genetic findings in sporadic and familial CC patients. METHODS: Patients (n = 53) who were clinically diagnosed with CC and their parents were recruited. Blood samples were collected in our hospital. Mutations were detected by panel-based next-generation DNA sequencing (NGS) targeting 792 genes frequently involved in common inherited eye diseases. RESULTS: We identified variants in 10/37 cases (27.02%) of sporadic CC and 14/16 cases (87.5%) of familial CC, which indicated a significant difference (P = 0.000). Of the 13 variants identified in sporadic cases, nine were previously reported mutations, and three were novel mutations, including one de novo mutation (CRYBB2 c.487C > T). The most frequent variants in our cohort were in crystallins and cytoskeletal genes (5/27, 18.52%), followed by proteins associated with X-linked syndromic conditions (14.81%) and transcriptional factors (11.11%). Additional information on the possibility of complications with inherited ocular or systemic diseases other than CC was provided in 17/27 (62.96%) variants. CONCLUSIONS: These results contribute to expanding the mutation spectrum and frequency of genes responsible for CC. Targeted NGS in CC provided significant diagnostic information and enabled more accurate genetic counselling. This study reports the different distributions of mutation genes in familial and sporadic CC cases. |
format | Online Article Text |
id | pubmed-7469093 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-74690932020-09-03 The mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing Fan, Fan Luo, Yi Wu, Jihong Gao, Chao Liu, Xin Mei, Hengjun Zhou, Xiyue BMC Ophthalmol Research Article BACKGROUND: Congenital cataract (CC) is a significant cause of lifelong visual loss, and its genetic diagnosis is challenging due to marked genetic heterogeneity. The purpose of this article is to report the genetic findings in sporadic and familial CC patients. METHODS: Patients (n = 53) who were clinically diagnosed with CC and their parents were recruited. Blood samples were collected in our hospital. Mutations were detected by panel-based next-generation DNA sequencing (NGS) targeting 792 genes frequently involved in common inherited eye diseases. RESULTS: We identified variants in 10/37 cases (27.02%) of sporadic CC and 14/16 cases (87.5%) of familial CC, which indicated a significant difference (P = 0.000). Of the 13 variants identified in sporadic cases, nine were previously reported mutations, and three were novel mutations, including one de novo mutation (CRYBB2 c.487C > T). The most frequent variants in our cohort were in crystallins and cytoskeletal genes (5/27, 18.52%), followed by proteins associated with X-linked syndromic conditions (14.81%) and transcriptional factors (11.11%). Additional information on the possibility of complications with inherited ocular or systemic diseases other than CC was provided in 17/27 (62.96%) variants. CONCLUSIONS: These results contribute to expanding the mutation spectrum and frequency of genes responsible for CC. Targeted NGS in CC provided significant diagnostic information and enabled more accurate genetic counselling. This study reports the different distributions of mutation genes in familial and sporadic CC cases. BioMed Central 2020-09-03 /pmc/articles/PMC7469093/ /pubmed/32883240 http://dx.doi.org/10.1186/s12886-020-01567-x Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Fan, Fan Luo, Yi Wu, Jihong Gao, Chao Liu, Xin Mei, Hengjun Zhou, Xiyue The mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing |
title | The mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing |
title_full | The mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing |
title_fullStr | The mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing |
title_full_unstemmed | The mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing |
title_short | The mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing |
title_sort | mutation spectrum in familial versus sporadic congenital cataract based on next-generation sequencing |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7469093/ https://www.ncbi.nlm.nih.gov/pubmed/32883240 http://dx.doi.org/10.1186/s12886-020-01567-x |
work_keys_str_mv | AT fanfan themutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT luoyi themutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT wujihong themutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT gaochao themutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT liuxin themutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT meihengjun themutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT zhouxiyue themutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT fanfan mutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT luoyi mutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT wujihong mutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT gaochao mutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT liuxin mutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT meihengjun mutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing AT zhouxiyue mutationspectruminfamilialversussporadiccongenitalcataractbasedonnextgenerationsequencing |