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Photochemical Mechanism of Light-Driven Fatty Acid Photodecarboxylase
[Image: see text] Fatty acid photodecarboxylase (FAP) is a promising target for the production of biofuels and fine chemicals. It contains a flavin adenine dinucleotide cofactor and catalyzes the blue-light-dependent decarboxylation of fatty acids to generate the corresponding alkane. However, littl...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7469136/ https://www.ncbi.nlm.nih.gov/pubmed/32905273 http://dx.doi.org/10.1021/acscatal.0c01684 |
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author | Heyes, Derren J. Lakavath, Balaji Hardman, Samantha J. O. Sakuma, Michiyo Hedison, Tobias M. Scrutton, Nigel S. |
author_facet | Heyes, Derren J. Lakavath, Balaji Hardman, Samantha J. O. Sakuma, Michiyo Hedison, Tobias M. Scrutton, Nigel S. |
author_sort | Heyes, Derren J. |
collection | PubMed |
description | [Image: see text] Fatty acid photodecarboxylase (FAP) is a promising target for the production of biofuels and fine chemicals. It contains a flavin adenine dinucleotide cofactor and catalyzes the blue-light-dependent decarboxylation of fatty acids to generate the corresponding alkane. However, little is known about the catalytic mechanism of FAP, or how light is used to drive enzymatic decarboxylation. Here, we have used a combination of time-resolved and cryogenic trapping UV–visible absorption spectroscopy to characterize a red-shifted flavin intermediate observed in the catalytic cycle of FAP. We show that this intermediate can form below the “glass transition” temperature of proteins, whereas the subsequent decay of the species proceeds only at higher temperatures, implying a role for protein motions in the decay of the intermediate. Solvent isotope effect measurements, combined with analyses of selected site-directed variants of FAP, suggest that the formation of the red-shifted flavin species is directly coupled with hydrogen atom transfer from a nearby active site cysteine residue, yielding the final alkane product. Our study suggests that this cysteine residue forms a thiolate-flavin charge-transfer species, which is assigned as the red-shifted flavin intermediate. Taken together, our data provide insights into light-dependent decarboxylase mechanisms catalyzed by FAP and highlight important considerations in the (re)design of flavin-based photoenzymes. |
format | Online Article Text |
id | pubmed-7469136 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-74691362020-09-04 Photochemical Mechanism of Light-Driven Fatty Acid Photodecarboxylase Heyes, Derren J. Lakavath, Balaji Hardman, Samantha J. O. Sakuma, Michiyo Hedison, Tobias M. Scrutton, Nigel S. ACS Catal [Image: see text] Fatty acid photodecarboxylase (FAP) is a promising target for the production of biofuels and fine chemicals. It contains a flavin adenine dinucleotide cofactor and catalyzes the blue-light-dependent decarboxylation of fatty acids to generate the corresponding alkane. However, little is known about the catalytic mechanism of FAP, or how light is used to drive enzymatic decarboxylation. Here, we have used a combination of time-resolved and cryogenic trapping UV–visible absorption spectroscopy to characterize a red-shifted flavin intermediate observed in the catalytic cycle of FAP. We show that this intermediate can form below the “glass transition” temperature of proteins, whereas the subsequent decay of the species proceeds only at higher temperatures, implying a role for protein motions in the decay of the intermediate. Solvent isotope effect measurements, combined with analyses of selected site-directed variants of FAP, suggest that the formation of the red-shifted flavin species is directly coupled with hydrogen atom transfer from a nearby active site cysteine residue, yielding the final alkane product. Our study suggests that this cysteine residue forms a thiolate-flavin charge-transfer species, which is assigned as the red-shifted flavin intermediate. Taken together, our data provide insights into light-dependent decarboxylase mechanisms catalyzed by FAP and highlight important considerations in the (re)design of flavin-based photoenzymes. American Chemical Society 2020-05-19 2020-06-19 /pmc/articles/PMC7469136/ /pubmed/32905273 http://dx.doi.org/10.1021/acscatal.0c01684 Text en Copyright © 2020 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Heyes, Derren J. Lakavath, Balaji Hardman, Samantha J. O. Sakuma, Michiyo Hedison, Tobias M. Scrutton, Nigel S. Photochemical Mechanism of Light-Driven Fatty Acid Photodecarboxylase |
title | Photochemical Mechanism of Light-Driven Fatty Acid
Photodecarboxylase |
title_full | Photochemical Mechanism of Light-Driven Fatty Acid
Photodecarboxylase |
title_fullStr | Photochemical Mechanism of Light-Driven Fatty Acid
Photodecarboxylase |
title_full_unstemmed | Photochemical Mechanism of Light-Driven Fatty Acid
Photodecarboxylase |
title_short | Photochemical Mechanism of Light-Driven Fatty Acid
Photodecarboxylase |
title_sort | photochemical mechanism of light-driven fatty acid
photodecarboxylase |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7469136/ https://www.ncbi.nlm.nih.gov/pubmed/32905273 http://dx.doi.org/10.1021/acscatal.0c01684 |
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