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Synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm
BACKGROUND: Drug repurposing aims to detect the new therapeutic benefits of the existing drugs and reduce the spent time and cost of the drug development projects. The synthetic repurposing of drugs may prove to be more useful than the single repurposing in terms of reducing toxicity and enhancing e...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7469914/ https://www.ncbi.nlm.nih.gov/pubmed/32677879 http://dx.doi.org/10.1186/s12859-020-03644-w |
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author | Masoudi-Sobhanzadeh, Yosef Masoudi-Nejad, Ali |
author_facet | Masoudi-Sobhanzadeh, Yosef Masoudi-Nejad, Ali |
author_sort | Masoudi-Sobhanzadeh, Yosef |
collection | PubMed |
description | BACKGROUND: Drug repurposing aims to detect the new therapeutic benefits of the existing drugs and reduce the spent time and cost of the drug development projects. The synthetic repurposing of drugs may prove to be more useful than the single repurposing in terms of reducing toxicity and enhancing efficacy. However, the researchers have not given it serious consideration. To address the issue, a novel datamining method is introduced and applied to repositioning of drugs for hypertension (HT) which is a serious medical condition and needs some improved treatment plans to help treat it. RESULTS: A novel two-step data mining method, which is based on the If-Then association rules as well as a novel discrete optimization algorithm, was introduced and applied to the synthetic repurposing of drugs for HT. The required data were also extracted from DrugBank, KEGG, and DrugR+ databases. The findings indicated that based on the different statistical criteria, the proposed method outperformed the other state-of-the-art approaches. In contrast to the previously proposed methods which had failed to discover a list on some datasets, our method could find a combination list for all of them. CONCLUSION: Since the proposed synthetic method uses medications in small dosages, it might revive some failed drug development projects and put forward a suitable plan for treating different diseases such as COVID-19 and HT. It is also worth noting that applying efficient computational methods helps to produce better results. |
format | Online Article Text |
id | pubmed-7469914 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-74699142020-09-09 Synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm Masoudi-Sobhanzadeh, Yosef Masoudi-Nejad, Ali BMC Bioinformatics Methodology Article BACKGROUND: Drug repurposing aims to detect the new therapeutic benefits of the existing drugs and reduce the spent time and cost of the drug development projects. The synthetic repurposing of drugs may prove to be more useful than the single repurposing in terms of reducing toxicity and enhancing efficacy. However, the researchers have not given it serious consideration. To address the issue, a novel datamining method is introduced and applied to repositioning of drugs for hypertension (HT) which is a serious medical condition and needs some improved treatment plans to help treat it. RESULTS: A novel two-step data mining method, which is based on the If-Then association rules as well as a novel discrete optimization algorithm, was introduced and applied to the synthetic repurposing of drugs for HT. The required data were also extracted from DrugBank, KEGG, and DrugR+ databases. The findings indicated that based on the different statistical criteria, the proposed method outperformed the other state-of-the-art approaches. In contrast to the previously proposed methods which had failed to discover a list on some datasets, our method could find a combination list for all of them. CONCLUSION: Since the proposed synthetic method uses medications in small dosages, it might revive some failed drug development projects and put forward a suitable plan for treating different diseases such as COVID-19 and HT. It is also worth noting that applying efficient computational methods helps to produce better results. BioMed Central 2020-07-16 /pmc/articles/PMC7469914/ /pubmed/32677879 http://dx.doi.org/10.1186/s12859-020-03644-w Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Methodology Article Masoudi-Sobhanzadeh, Yosef Masoudi-Nejad, Ali Synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm |
title | Synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm |
title_full | Synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm |
title_fullStr | Synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm |
title_full_unstemmed | Synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm |
title_short | Synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm |
title_sort | synthetic repurposing of drugs against hypertension: a datamining method based on association rules and a novel discrete algorithm |
topic | Methodology Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7469914/ https://www.ncbi.nlm.nih.gov/pubmed/32677879 http://dx.doi.org/10.1186/s12859-020-03644-w |
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