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Mathematical basis for the assessment of antibiotic resistance and administrative counter-strategies
Diversity as well as temporal and spatial changes of the proportional abundances of different antibiotics (cycling, mixing or combinations thereof) have been hypothesised to be an effective administrative control strategy in hospitals to reduce the prevalence of antibiotic-resistant pathogens in nos...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7470328/ https://www.ncbi.nlm.nih.gov/pubmed/32881947 http://dx.doi.org/10.1371/journal.pone.0238692 |
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author | Diebner, Hans H. Kather, Anna Roeder, Ingo de With, Katja |
author_facet | Diebner, Hans H. Kather, Anna Roeder, Ingo de With, Katja |
author_sort | Diebner, Hans H. |
collection | PubMed |
description | Diversity as well as temporal and spatial changes of the proportional abundances of different antibiotics (cycling, mixing or combinations thereof) have been hypothesised to be an effective administrative control strategy in hospitals to reduce the prevalence of antibiotic-resistant pathogens in nosocomial or community-acquired infections. However, a rigorous assessment of the efficacy of these control strategies is lacking. The main purpose here is to present a mathematical framework for the assessment of control stategies from a processual stance. To this end, we adopt diverse measures of heterogeneity and diversity of proportional abundances based on the concept of entropy from other fields and adapt them to the needs in assessing the impact of variations in antibiotic consumption on antibiotic resistance. Thereby, we derive a family of diversity measures whose members exhibit different degrees of complexity. Most important, we extent these measures such that they account for the assessment of temporal changes in heterogeneity including otherwise undetected diversity-invariant permutations of antibiotics consumption and prevalence of resistant pathogens. We apply a correlation analysis for the assessment of associations between changes of heterogeneities on the antibiotics and on the pathogen side. As a showcase, which serves as a proof-of-principle, we apply the derived methods to records of antibiotic consumption and prevalence of antibiotic-resistant germs from University Hospital Dresden (cf. supplement “DiebnerEtAl_Data-Supplement”). Besides the quantification of heterogeneities of antibiotics consumption and antibiotic resistance, we show that a reduction of prevalence of antibiotic-resistant germs correlates with a temporal change of similarity with respect to the first observation of antibiotics consumption, although heterogeneity remains approximately constant. Although an interventional study is pending, our mathematical framework turns out to be a viable concept for the assessment and optimisation of control strategies intended to reduce antibiotic resistance. |
format | Online Article Text |
id | pubmed-7470328 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-74703282020-09-11 Mathematical basis for the assessment of antibiotic resistance and administrative counter-strategies Diebner, Hans H. Kather, Anna Roeder, Ingo de With, Katja PLoS One Research Article Diversity as well as temporal and spatial changes of the proportional abundances of different antibiotics (cycling, mixing or combinations thereof) have been hypothesised to be an effective administrative control strategy in hospitals to reduce the prevalence of antibiotic-resistant pathogens in nosocomial or community-acquired infections. However, a rigorous assessment of the efficacy of these control strategies is lacking. The main purpose here is to present a mathematical framework for the assessment of control stategies from a processual stance. To this end, we adopt diverse measures of heterogeneity and diversity of proportional abundances based on the concept of entropy from other fields and adapt them to the needs in assessing the impact of variations in antibiotic consumption on antibiotic resistance. Thereby, we derive a family of diversity measures whose members exhibit different degrees of complexity. Most important, we extent these measures such that they account for the assessment of temporal changes in heterogeneity including otherwise undetected diversity-invariant permutations of antibiotics consumption and prevalence of resistant pathogens. We apply a correlation analysis for the assessment of associations between changes of heterogeneities on the antibiotics and on the pathogen side. As a showcase, which serves as a proof-of-principle, we apply the derived methods to records of antibiotic consumption and prevalence of antibiotic-resistant germs from University Hospital Dresden (cf. supplement “DiebnerEtAl_Data-Supplement”). Besides the quantification of heterogeneities of antibiotics consumption and antibiotic resistance, we show that a reduction of prevalence of antibiotic-resistant germs correlates with a temporal change of similarity with respect to the first observation of antibiotics consumption, although heterogeneity remains approximately constant. Although an interventional study is pending, our mathematical framework turns out to be a viable concept for the assessment and optimisation of control strategies intended to reduce antibiotic resistance. Public Library of Science 2020-09-03 /pmc/articles/PMC7470328/ /pubmed/32881947 http://dx.doi.org/10.1371/journal.pone.0238692 Text en © 2020 Diebner et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Diebner, Hans H. Kather, Anna Roeder, Ingo de With, Katja Mathematical basis for the assessment of antibiotic resistance and administrative counter-strategies |
title | Mathematical basis for the assessment of antibiotic resistance and administrative counter-strategies |
title_full | Mathematical basis for the assessment of antibiotic resistance and administrative counter-strategies |
title_fullStr | Mathematical basis for the assessment of antibiotic resistance and administrative counter-strategies |
title_full_unstemmed | Mathematical basis for the assessment of antibiotic resistance and administrative counter-strategies |
title_short | Mathematical basis for the assessment of antibiotic resistance and administrative counter-strategies |
title_sort | mathematical basis for the assessment of antibiotic resistance and administrative counter-strategies |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7470328/ https://www.ncbi.nlm.nih.gov/pubmed/32881947 http://dx.doi.org/10.1371/journal.pone.0238692 |
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