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Semi-automated identification of biological control agent using artificial intelligence
The accurate identification of biological control agents is necessary for monitoring and preventing contamination in integrated pest management (IPM); however, this is difficult for non-taxonomists to achieve in the field. Many machine learning techniques have been developed for multiple application...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7471324/ https://www.ncbi.nlm.nih.gov/pubmed/32884097 http://dx.doi.org/10.1038/s41598-020-71798-x |
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author | Liao, Jhih-Rong Lee, Hsiao-Chin Chiu, Ming-Chih Ko, Chiun-Cheng |
author_facet | Liao, Jhih-Rong Lee, Hsiao-Chin Chiu, Ming-Chih Ko, Chiun-Cheng |
author_sort | Liao, Jhih-Rong |
collection | PubMed |
description | The accurate identification of biological control agents is necessary for monitoring and preventing contamination in integrated pest management (IPM); however, this is difficult for non-taxonomists to achieve in the field. Many machine learning techniques have been developed for multiple applications (e.g., identification of biological organisms). Some phytoseiids are biological control agents for small pests, such as Neoseiulus barkeri Hughes. To identify a precise biological control agent, a boosting machine learning classification, namely eXtreme Gradient Boosting (XGBoost), was introduced in this study for the semi-automated identification of phytoseiid mites. XGBoost analyses were based on 22 quantitative morphological features among 512 specimens of N. barkeri and related phytoseiid species. These features were extracted manually from photomicrograph of mites and included dorsal and ventrianal shield lengths, setal lengths, and length and width of spermatheca. The results revealed 100% accuracy rating, and seta j4 achieved significant discrimination among specimens. The present study provides a path through which skills and experiences can be transferred between experts and non-experts. This can serve as a foundation for future studies on the automated identification of biological control agents for IPM. |
format | Online Article Text |
id | pubmed-7471324 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-74713242020-09-04 Semi-automated identification of biological control agent using artificial intelligence Liao, Jhih-Rong Lee, Hsiao-Chin Chiu, Ming-Chih Ko, Chiun-Cheng Sci Rep Article The accurate identification of biological control agents is necessary for monitoring and preventing contamination in integrated pest management (IPM); however, this is difficult for non-taxonomists to achieve in the field. Many machine learning techniques have been developed for multiple applications (e.g., identification of biological organisms). Some phytoseiids are biological control agents for small pests, such as Neoseiulus barkeri Hughes. To identify a precise biological control agent, a boosting machine learning classification, namely eXtreme Gradient Boosting (XGBoost), was introduced in this study for the semi-automated identification of phytoseiid mites. XGBoost analyses were based on 22 quantitative morphological features among 512 specimens of N. barkeri and related phytoseiid species. These features were extracted manually from photomicrograph of mites and included dorsal and ventrianal shield lengths, setal lengths, and length and width of spermatheca. The results revealed 100% accuracy rating, and seta j4 achieved significant discrimination among specimens. The present study provides a path through which skills and experiences can be transferred between experts and non-experts. This can serve as a foundation for future studies on the automated identification of biological control agents for IPM. Nature Publishing Group UK 2020-09-03 /pmc/articles/PMC7471324/ /pubmed/32884097 http://dx.doi.org/10.1038/s41598-020-71798-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Liao, Jhih-Rong Lee, Hsiao-Chin Chiu, Ming-Chih Ko, Chiun-Cheng Semi-automated identification of biological control agent using artificial intelligence |
title | Semi-automated identification of biological control agent using artificial intelligence |
title_full | Semi-automated identification of biological control agent using artificial intelligence |
title_fullStr | Semi-automated identification of biological control agent using artificial intelligence |
title_full_unstemmed | Semi-automated identification of biological control agent using artificial intelligence |
title_short | Semi-automated identification of biological control agent using artificial intelligence |
title_sort | semi-automated identification of biological control agent using artificial intelligence |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7471324/ https://www.ncbi.nlm.nih.gov/pubmed/32884097 http://dx.doi.org/10.1038/s41598-020-71798-x |
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