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Genome-wide association study for circulating fibroblast growth factor 21 and 23
Fibroblast growth factors (FGFs) 21 and 23 are recently identified hormones regulating metabolism of glucose, lipid, phosphate and vitamin D. Here we conducted a genome-wide association study (GWAS) for circulating FGF21 and FGF23 concentrations to identify their genetic determinants. We enrolled 5,...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7471933/ https://www.ncbi.nlm.nih.gov/pubmed/32884031 http://dx.doi.org/10.1038/s41598-020-71569-8 |
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author | Chuang, Gwo-Tsann Liu, Pi-Hua Chyan, Tsui-Wei Huang, Chen-Hao Huang, Yu-Yao Lin, Chia-Hung Lin, Jou-Wei Hsu, Chih-Neng Tsai, Ru-Yi Hsieh, Meng-Lun Lee, Hsiao-Lin Yang, Wei-shun Robinson-Cohen, Cassianne Hsiung, Chia-Ni Shen, Chen-Yang Chang, Yi-Cheng |
author_facet | Chuang, Gwo-Tsann Liu, Pi-Hua Chyan, Tsui-Wei Huang, Chen-Hao Huang, Yu-Yao Lin, Chia-Hung Lin, Jou-Wei Hsu, Chih-Neng Tsai, Ru-Yi Hsieh, Meng-Lun Lee, Hsiao-Lin Yang, Wei-shun Robinson-Cohen, Cassianne Hsiung, Chia-Ni Shen, Chen-Yang Chang, Yi-Cheng |
author_sort | Chuang, Gwo-Tsann |
collection | PubMed |
description | Fibroblast growth factors (FGFs) 21 and 23 are recently identified hormones regulating metabolism of glucose, lipid, phosphate and vitamin D. Here we conducted a genome-wide association study (GWAS) for circulating FGF21 and FGF23 concentrations to identify their genetic determinants. We enrolled 5,000 participants from Taiwan Biobank for this GWAS. After excluding participants with diabetes mellitus and quality control, association of single nucleotide polymorphisms (SNPs) with log-transformed FGF21 and FGF23 serum concentrations adjusted for age, sex and principal components of ancestry were analyzed. A second model additionally adjusted for body mass index (BMI) and a third model additionally adjusted for BMI and estimated glomerular filtration rate (eGFR) were used. A total of 4,201 participants underwent GWAS analysis. rs67327215, located within RGS6 (a gene involved in fatty acid synthesis), and two other SNPs (rs12565114 and rs9520257, located between PHC2-ZSCAN20 and ARGLU1-FAM155A respectively) showed suggestive associations with serum FGF21 level (P = 6.66 × 10(–7), 6.00 × 10(–7) and 6.11 × 10(–7) respectively). The SNPs rs17111495 and rs17843626 were significantly associated with FGF23 level, with the former near PCSK9 gene and the latter near HLA-DQA1 gene (P = 1.04 × 10(–10) and 1.80 × 10(–8) respectively). SNP rs2798631, located within the TGFB2 gene, was suggestively associated with serum FGF23 level (P = 4.97 × 10(–7)). Additional adjustment for BMI yielded similar results. For FGF23, further adjustment for eGFR had similar results. We conducted the first GWAS of circulating FGF21 levels to date. Novel candidate genetic loci associated with circulating FGF21 or FGF23 levels were found. Further replication and functional studies are needed to support our findings. |
format | Online Article Text |
id | pubmed-7471933 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-74719332020-09-08 Genome-wide association study for circulating fibroblast growth factor 21 and 23 Chuang, Gwo-Tsann Liu, Pi-Hua Chyan, Tsui-Wei Huang, Chen-Hao Huang, Yu-Yao Lin, Chia-Hung Lin, Jou-Wei Hsu, Chih-Neng Tsai, Ru-Yi Hsieh, Meng-Lun Lee, Hsiao-Lin Yang, Wei-shun Robinson-Cohen, Cassianne Hsiung, Chia-Ni Shen, Chen-Yang Chang, Yi-Cheng Sci Rep Article Fibroblast growth factors (FGFs) 21 and 23 are recently identified hormones regulating metabolism of glucose, lipid, phosphate and vitamin D. Here we conducted a genome-wide association study (GWAS) for circulating FGF21 and FGF23 concentrations to identify their genetic determinants. We enrolled 5,000 participants from Taiwan Biobank for this GWAS. After excluding participants with diabetes mellitus and quality control, association of single nucleotide polymorphisms (SNPs) with log-transformed FGF21 and FGF23 serum concentrations adjusted for age, sex and principal components of ancestry were analyzed. A second model additionally adjusted for body mass index (BMI) and a third model additionally adjusted for BMI and estimated glomerular filtration rate (eGFR) were used. A total of 4,201 participants underwent GWAS analysis. rs67327215, located within RGS6 (a gene involved in fatty acid synthesis), and two other SNPs (rs12565114 and rs9520257, located between PHC2-ZSCAN20 and ARGLU1-FAM155A respectively) showed suggestive associations with serum FGF21 level (P = 6.66 × 10(–7), 6.00 × 10(–7) and 6.11 × 10(–7) respectively). The SNPs rs17111495 and rs17843626 were significantly associated with FGF23 level, with the former near PCSK9 gene and the latter near HLA-DQA1 gene (P = 1.04 × 10(–10) and 1.80 × 10(–8) respectively). SNP rs2798631, located within the TGFB2 gene, was suggestively associated with serum FGF23 level (P = 4.97 × 10(–7)). Additional adjustment for BMI yielded similar results. For FGF23, further adjustment for eGFR had similar results. We conducted the first GWAS of circulating FGF21 levels to date. Novel candidate genetic loci associated with circulating FGF21 or FGF23 levels were found. Further replication and functional studies are needed to support our findings. Nature Publishing Group UK 2020-09-03 /pmc/articles/PMC7471933/ /pubmed/32884031 http://dx.doi.org/10.1038/s41598-020-71569-8 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Chuang, Gwo-Tsann Liu, Pi-Hua Chyan, Tsui-Wei Huang, Chen-Hao Huang, Yu-Yao Lin, Chia-Hung Lin, Jou-Wei Hsu, Chih-Neng Tsai, Ru-Yi Hsieh, Meng-Lun Lee, Hsiao-Lin Yang, Wei-shun Robinson-Cohen, Cassianne Hsiung, Chia-Ni Shen, Chen-Yang Chang, Yi-Cheng Genome-wide association study for circulating fibroblast growth factor 21 and 23 |
title | Genome-wide association study for circulating fibroblast growth factor 21 and 23 |
title_full | Genome-wide association study for circulating fibroblast growth factor 21 and 23 |
title_fullStr | Genome-wide association study for circulating fibroblast growth factor 21 and 23 |
title_full_unstemmed | Genome-wide association study for circulating fibroblast growth factor 21 and 23 |
title_short | Genome-wide association study for circulating fibroblast growth factor 21 and 23 |
title_sort | genome-wide association study for circulating fibroblast growth factor 21 and 23 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7471933/ https://www.ncbi.nlm.nih.gov/pubmed/32884031 http://dx.doi.org/10.1038/s41598-020-71569-8 |
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