Cargando…

Viral Metagenomic Content Reflects Seawater Ecological Quality in the Coastal Zone

Viruses interfere with their host’s metabolism through the expression of auxiliary metabolic genes (AMGs) that, until now, are mostly studied under large physicochemical gradients. Here, we focus on coastal marine ecosystems and we sequence the viral metagenome (virome) of samples with discrete leve...

Descripción completa

Detalles Bibliográficos
Autores principales:	Tsiola, Anastasia, Michoud, Grégoire, Fodelianakis, Stilianos, Karakassis, Ioannis, Kotoulas, Georgios, Pavlidou, Alexandra, Pavloudi, Christina, Pitta, Paraskevi, Simboura, Nomiki, Daffonchio, Daniele, Tsapakis, Manolis
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2020
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7472104/ https://www.ncbi.nlm.nih.gov/pubmed/32722579 http://dx.doi.org/10.3390/v12080806

Ejemplares similares

Depth-driven patterns in lytic viral diversity, auxiliary metabolic gene content, and productivity in offshore oligotrophic waters
por: Tsiola, Anastasia, et al.
Publicado: (2023)

Responses of Free-Living Planktonic Bacterial Communities to Experimental Acidification and Warming
por: Tsiola, Anastasia, et al.
Publicado: (2023)

One Step forward: Benthic Pelagic Coupling and Indicators for Environmental Status
por: Dimitriou, Panagiotis D., et al.
Publicado: (2015)

The role of fungi in heterogeneous sediment microbial networks
por: Marie Booth, Jenny, et al.
Publicado: (2019)

Tracking the early signals of crude oil in seawater and plankton after a major oil spill in the Red Sea
por: Kottuparambil, Sreejith, et al.
Publicado: (2023)

Polychaetes of Greece: an updated and annotated checklist
por: Faulwetter, Sarah, et al.
Publicado: (2017)

Metagenomics: Tools and Insights for Analyzing Next-Generation Sequencing Data Derived from Biodiversity Studies
por: Oulas, Anastasis, et al.
Publicado: (2015)

Gill-associated bacteria are homogeneously selected in amphibious mangrove crabs to sustain host intertidal adaptation
por: Fusi, Marco, et al.
Publicado: (2023)

Direct quantification of ecological drift at the population level in synthetic bacterial communities
por: Fodelianakis, Stilianos, et al.
Publicado: (2020)

Optimised biomolecular extraction for metagenomic analysis of microbial biofilms from high-mountain streams
por: Busi, Susheel Bhanu, et al.
Publicado: (2020)

Genomic and metabolic adaptations of biofilms to ecological windows of opportunity in glacier-fed streams
por: Busi, Susheel Bhanu, et al.
Publicado: (2022)

Microbial acetone oxidation in coastal seawater
por: Dixon, Joanna L., et al.
Publicado: (2014)

Glacier shrinkage will accelerate downstream decomposition of organic matter and alters microbiome structure and function
por: Kohler, Tyler J., et al.
Publicado: (2022)

Spatial patterns of benthic biofilm diversity among streams draining proglacial floodplains
por: Brandani, Jade, et al.
Publicado: (2022)

Exploring the Impacts of Anthropogenic Disturbance on Seawater and Sediment Microbial Communities in Korean Coastal Waters Using Metagenomics Analysis
por: Won, Nam-Il, et al.
Publicado: (2017)

Phenomics and Genomics Reveal Adaptation of Virgibacillus dokdonensis Strain 21D to Its Origin of Isolation, the Seawater-Brine Interface of the Mediterranean Sea Deep Hypersaline Anoxic Basin Discovery
por: Zeaiter, Zahraa, et al.
Publicado: (2019)

Grapevine rootstocks shape underground bacterial microbiome and networking but not potential functionality
por: Marasco, Ramona, et al.
Publicado: (2018)

Dispersal homogenizes communities via immigration even at low rates in a simplified synthetic bacterial metacommunity
por: Fodelianakis, Stilianos, et al.
Publicado: (2019)

Publisher Correction: Dispersal homogenizes communities via immigration even at low rates in a simplified synthetic bacterial metacommunity
por: Fodelianakis, Stilianos, et al.
Publicado: (2019)

Metagenomic Analysis of Upwelling-Affected Brazilian Coastal Seawater Reveals Sequence Domains of Type I PKS and Modular NRPS
por: Cuadrat, Rafael R. C., et al.
Publicado: (2015)

The microbiome of cryospheric ecosystems
por: Bourquin, Massimo, et al.
Publicado: (2022)

Homogeneous Environmental Selection Structures the Bacterial Communities of Benthic Biofilms in Proglacial Floodplain Streams
por: Brandani, Jade, et al.
Publicado: (2023)

Mangrovivirga cuniculi gen. nov., sp. nov., a moderately halophilic bacterium isolated from bioturbated Red Sea mangrove sediment, and proposal of the novel family Mangrovivirgaceae fam. nov.
por: Sefrji, Fatmah O., et al.
Publicado: (2021)

Assessment of parasitic pollution in the coastal seawater of Gaza city
por: Hilles, Ahmed Hisham, et al.
Publicado: (2014)

Microbial communities related to biodegradation of dispersed Macondo oil at low seawater temperature with Norwegian coastal seawater
por: Brakstad, Odd G, et al.
Publicado: (2015)

Relationships of pelagic ciliates with the microbial food web components at a coastal station in the oligotrophic Eastern Mediterranean Sea: temporal and vertical variability
por: Romano, Filomena, et al.
Publicado: (2021)

Macroalgal Morphogenesis Induced by Waterborne Compounds and Bacteria in Coastal Seawater
por: Grueneberg, Jan, et al.
Publicado: (2016)

The potential role of kelp forests on iodine speciation in coastal seawater
por: Gonzales, Jennifer, et al.
Publicado: (2017)

Groundwater Throughflow and Seawater Intrusion in High Quality Coastal Aquifers
por: Costall, A. R., et al.
Publicado: (2020)

Metagenomes of Mediterranean Coastal Lagoons
por: Ghai, Rohit, et al.
Publicado: (2012)

Corrigendum: Kaustia mangrovi gen. nov., sp. nov. isolated from Red Sea mangrove sediments belongs to the recently proposed Parvibaculaceae family within the order Rhizobiales
por: Sefrji, Fatmah O., et al.
Publicado: (2021)

Insights Into the Cultivable Bacterial Fraction of Sediments From the Red Sea Mangroves and Physiological, Chemotaxonomic, and Genomic Characterization of Mangrovibacillus cuniculi gen. nov., sp. nov., a Novel Member of the Bacillaceae Family
por: Sefrji, Fatmah O., et al.
Publicado: (2022)

Kaustia mangrovi gen. nov., sp. nov. isolated from Red Sea mangrove sediments belongs to the recently proposed Parvibaculaceae family within the order Rhizobiales
por: Sefrji, Fatmah O., et al.
Publicado: (2021)

Glacier-Fed Stream Biofilms Harbor Diverse Resistomes and Biosynthetic Gene Clusters
por: Busi, Susheel Bhanu, et al.
Publicado: (2023)

Correction: The potential role of kelp forests on iodine speciation in coastal seawater
por: Gonzales, Jennifer, et al.
Publicado: (2017)

Flow Cytometry for Rapid Enumeration and Biomass Quantification of Thraustochytrids in Coastal Seawaters
por: Duan, Yingbo, et al.
Publicado: (2018)

Early Colonization of Weathered Polyethylene by Distinct Bacteria in Marine Coastal Seawater
por: Erni-Cassola, Gabriel, et al.
Publicado: (2019)

Consistent bacterial selection by date palm root system across heterogeneous desert oasis agroecosystems
por: Mosqueira, Maria J., et al.
Publicado: (2019)

Community dynamics and co-occurrence relationships of pelagic ciliates and their potential prey at a coastal and an offshore station in the ultra-oligotrophic Eastern Mediterranean Sea
por: Romano, Filomena, et al.
Publicado: (2023)

Metagenomic Sequencing of Prokaryotic Microbiota from Tropical Surface Seawater
por: Chan, Xin Yue, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_dcbqsnkdqok1jlavf7qu712784