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Identification of risk factors for mortality associated with COVID-19

OBJECTIVES: Coronavirus Disease 2019 (COVID-19) has become a pandemic outbreak. Risk stratification at hospital admission is of vital importance for medical decision making and resource allocation. There is no sophisticated tool for this purpose. This study aimed to develop neural network models wit...

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Autores principales: Yu, Yuetian, Zhu, Cheng, Yang, Luyu, Dong, Hui, Wang, Ruilan, Ni, Hongying, Chen, Erzhen, Zhang, Zhongheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7473053/
https://www.ncbi.nlm.nih.gov/pubmed/32953279
http://dx.doi.org/10.7717/peerj.9885
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author Yu, Yuetian
Zhu, Cheng
Yang, Luyu
Dong, Hui
Wang, Ruilan
Ni, Hongying
Chen, Erzhen
Zhang, Zhongheng
author_facet Yu, Yuetian
Zhu, Cheng
Yang, Luyu
Dong, Hui
Wang, Ruilan
Ni, Hongying
Chen, Erzhen
Zhang, Zhongheng
author_sort Yu, Yuetian
collection PubMed
description OBJECTIVES: Coronavirus Disease 2019 (COVID-19) has become a pandemic outbreak. Risk stratification at hospital admission is of vital importance for medical decision making and resource allocation. There is no sophisticated tool for this purpose. This study aimed to develop neural network models with predictors selected by genetic algorithms (GA). METHODS: This study was conducted in Wuhan Third Hospital from January 2020 to March 2020. Predictors were collected on day 1 of hospital admission. The primary outcome was the vital status at hospital discharge. Predictors were selected by using GA, and neural network models were built with the cross-validation method. The final neural network models were compared with conventional logistic regression models. RESULTS: A total of 246 patients with COVID-19 were included for analysis. The mortality rate was 17.1% (42/246). Non-survivors were significantly older (median (IQR): 69 (57, 77) vs. 55 (41, 63) years; p < 0.001), had higher high-sensitive troponin I (0.03 (0, 0.06) vs. 0 (0, 0.01) ng/L; p < 0.001), C-reactive protein (85.75 (57.39, 164.65) vs. 23.49 (10.1, 53.59) mg/L; p < 0.001), D-dimer (0.99 (0.44, 2.96) vs. 0.52 (0.26, 0.96) mg/L; p < 0.001), and α-hydroxybutyrate dehydrogenase (306.5 (268.75, 377.25) vs. 194.5 (160.75, 247.5); p < 0.001) and a lower level of lymphocyte count (0.74 (0.41, 0.96) vs. 0.98 (0.77, 1.26) × 10(9)/L; p < 0.001) than survivors. The GA identified a 9-variable (NNet1) and a 32-variable model (NNet2). The NNet1 model was parsimonious with a cost on accuracy; the NNet2 model had the maximum accuracy. NNet1 (AUC: 0.806; 95% CI [0.693–0.919]) and NNet2 (AUC: 0.922; 95% CI [0.859–0.985]) outperformed the linear regression models. CONCLUSIONS: Our study included a cohort of COVID-19 patients. Several risk factors were identified considering both clinical and statistical significance. We further developed two neural network models, with the variables selected by using GA. The model performs much better than the conventional generalized linear models.
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spelling pubmed-74730532020-09-17 Identification of risk factors for mortality associated with COVID-19 Yu, Yuetian Zhu, Cheng Yang, Luyu Dong, Hui Wang, Ruilan Ni, Hongying Chen, Erzhen Zhang, Zhongheng PeerJ Epidemiology OBJECTIVES: Coronavirus Disease 2019 (COVID-19) has become a pandemic outbreak. Risk stratification at hospital admission is of vital importance for medical decision making and resource allocation. There is no sophisticated tool for this purpose. This study aimed to develop neural network models with predictors selected by genetic algorithms (GA). METHODS: This study was conducted in Wuhan Third Hospital from January 2020 to March 2020. Predictors were collected on day 1 of hospital admission. The primary outcome was the vital status at hospital discharge. Predictors were selected by using GA, and neural network models were built with the cross-validation method. The final neural network models were compared with conventional logistic regression models. RESULTS: A total of 246 patients with COVID-19 were included for analysis. The mortality rate was 17.1% (42/246). Non-survivors were significantly older (median (IQR): 69 (57, 77) vs. 55 (41, 63) years; p < 0.001), had higher high-sensitive troponin I (0.03 (0, 0.06) vs. 0 (0, 0.01) ng/L; p < 0.001), C-reactive protein (85.75 (57.39, 164.65) vs. 23.49 (10.1, 53.59) mg/L; p < 0.001), D-dimer (0.99 (0.44, 2.96) vs. 0.52 (0.26, 0.96) mg/L; p < 0.001), and α-hydroxybutyrate dehydrogenase (306.5 (268.75, 377.25) vs. 194.5 (160.75, 247.5); p < 0.001) and a lower level of lymphocyte count (0.74 (0.41, 0.96) vs. 0.98 (0.77, 1.26) × 10(9)/L; p < 0.001) than survivors. The GA identified a 9-variable (NNet1) and a 32-variable model (NNet2). The NNet1 model was parsimonious with a cost on accuracy; the NNet2 model had the maximum accuracy. NNet1 (AUC: 0.806; 95% CI [0.693–0.919]) and NNet2 (AUC: 0.922; 95% CI [0.859–0.985]) outperformed the linear regression models. CONCLUSIONS: Our study included a cohort of COVID-19 patients. Several risk factors were identified considering both clinical and statistical significance. We further developed two neural network models, with the variables selected by using GA. The model performs much better than the conventional generalized linear models. PeerJ Inc. 2020-09-01 /pmc/articles/PMC7473053/ /pubmed/32953279 http://dx.doi.org/10.7717/peerj.9885 Text en © 2020 Yu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Epidemiology
Yu, Yuetian
Zhu, Cheng
Yang, Luyu
Dong, Hui
Wang, Ruilan
Ni, Hongying
Chen, Erzhen
Zhang, Zhongheng
Identification of risk factors for mortality associated with COVID-19
title Identification of risk factors for mortality associated with COVID-19
title_full Identification of risk factors for mortality associated with COVID-19
title_fullStr Identification of risk factors for mortality associated with COVID-19
title_full_unstemmed Identification of risk factors for mortality associated with COVID-19
title_short Identification of risk factors for mortality associated with COVID-19
title_sort identification of risk factors for mortality associated with covid-19
topic Epidemiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7473053/
https://www.ncbi.nlm.nih.gov/pubmed/32953279
http://dx.doi.org/10.7717/peerj.9885
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