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Combining agent-based, trait-based and demographic approaches to model coral-community dynamics

The complexity of coral-reef ecosystems makes it challenging to predict their dynamics and resilience under future disturbance regimes. Models for coral-reef dynamics do not adequately account for the high functional diversity exhibited by corals. Models that are ecologically and mechanistically det...

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Autores principales: Carturan, Bruno Sylvain, Pither, Jason, Maréchal, Jean-Philippe, Bradshaw, Corey JA, Parrott, Lael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7473774/
https://www.ncbi.nlm.nih.gov/pubmed/32701058
http://dx.doi.org/10.7554/eLife.55993
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author Carturan, Bruno Sylvain
Pither, Jason
Maréchal, Jean-Philippe
Bradshaw, Corey JA
Parrott, Lael
author_facet Carturan, Bruno Sylvain
Pither, Jason
Maréchal, Jean-Philippe
Bradshaw, Corey JA
Parrott, Lael
author_sort Carturan, Bruno Sylvain
collection PubMed
description The complexity of coral-reef ecosystems makes it challenging to predict their dynamics and resilience under future disturbance regimes. Models for coral-reef dynamics do not adequately account for the high functional diversity exhibited by corals. Models that are ecologically and mechanistically detailed are therefore required to simulate the ecological processes driving coral reef dynamics. Here, we describe a novel model that includes processes at different spatial scales, and the contribution of species’ functional diversity to benthic-community dynamics. We calibrated and validated the model to reproduce observed dynamics using empirical data from Caribbean reefs. The model exhibits realistic community dynamics, and individual population dynamics are ecologically plausible. A global sensitivity analysis revealed that the number of larvae produced locally, and interaction-induced reductions in growth rate are the parameters with the largest influence on community dynamics. The model provides a platform for virtual experiments to explore diversity-functioning relationships in coral reefs.
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spelling pubmed-74737742020-09-08 Combining agent-based, trait-based and demographic approaches to model coral-community dynamics Carturan, Bruno Sylvain Pither, Jason Maréchal, Jean-Philippe Bradshaw, Corey JA Parrott, Lael eLife Computational and Systems Biology The complexity of coral-reef ecosystems makes it challenging to predict their dynamics and resilience under future disturbance regimes. Models for coral-reef dynamics do not adequately account for the high functional diversity exhibited by corals. Models that are ecologically and mechanistically detailed are therefore required to simulate the ecological processes driving coral reef dynamics. Here, we describe a novel model that includes processes at different spatial scales, and the contribution of species’ functional diversity to benthic-community dynamics. We calibrated and validated the model to reproduce observed dynamics using empirical data from Caribbean reefs. The model exhibits realistic community dynamics, and individual population dynamics are ecologically plausible. A global sensitivity analysis revealed that the number of larvae produced locally, and interaction-induced reductions in growth rate are the parameters with the largest influence on community dynamics. The model provides a platform for virtual experiments to explore diversity-functioning relationships in coral reefs. eLife Sciences Publications, Ltd 2020-07-23 /pmc/articles/PMC7473774/ /pubmed/32701058 http://dx.doi.org/10.7554/eLife.55993 Text en © 2020, Carturan et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Computational and Systems Biology
Carturan, Bruno Sylvain
Pither, Jason
Maréchal, Jean-Philippe
Bradshaw, Corey JA
Parrott, Lael
Combining agent-based, trait-based and demographic approaches to model coral-community dynamics
title Combining agent-based, trait-based and demographic approaches to model coral-community dynamics
title_full Combining agent-based, trait-based and demographic approaches to model coral-community dynamics
title_fullStr Combining agent-based, trait-based and demographic approaches to model coral-community dynamics
title_full_unstemmed Combining agent-based, trait-based and demographic approaches to model coral-community dynamics
title_short Combining agent-based, trait-based and demographic approaches to model coral-community dynamics
title_sort combining agent-based, trait-based and demographic approaches to model coral-community dynamics
topic Computational and Systems Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7473774/
https://www.ncbi.nlm.nih.gov/pubmed/32701058
http://dx.doi.org/10.7554/eLife.55993
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