Cargando…

A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis

A two-step method is reported for preparation of genomic DNA from the model cyanobacterium Synechocystis that can be performed with minimal equipment and reagents in about an hour. High yields of genetic material can be obtained (200–450 ng/μl) with reasonable purity. A further ethanol precipitation...

Descripción completa

Detalles Bibliográficos
Autores principales: Harrison, Dale J A, Thompson, Elinor P
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7474859/
https://www.ncbi.nlm.nih.gov/pubmed/32913895
http://dx.doi.org/10.1093/biomethods/bpaa011
_version_ 1783579403941314560
author Harrison, Dale J A
Thompson, Elinor P
author_facet Harrison, Dale J A
Thompson, Elinor P
author_sort Harrison, Dale J A
collection PubMed
description A two-step method is reported for preparation of genomic DNA from the model cyanobacterium Synechocystis that can be performed with minimal equipment and reagents in about an hour. High yields of genetic material can be obtained (200–450 ng/μl) with reasonable purity. A further ethanol precipitation step can be included but is not necessary if template is simply required for polymerase chain reaction (PCR) or digestion. This new protocol is helpful for amplification of genes of interest in early-stage research projects and for low throughput screening of transformants. It is more reliable than colony PCR of Synechocystis cultures, and less involved and cheaper than existing clean-DNA preparation methods. It represents an unusually simple and reliable extraction protocol for the growing body of research making use of this cyanobacterium.
format Online
Article
Text
id pubmed-7474859
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-74748592020-09-09 A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis Harrison, Dale J A Thompson, Elinor P Biol Methods Protoc Methods Manuscript A two-step method is reported for preparation of genomic DNA from the model cyanobacterium Synechocystis that can be performed with minimal equipment and reagents in about an hour. High yields of genetic material can be obtained (200–450 ng/μl) with reasonable purity. A further ethanol precipitation step can be included but is not necessary if template is simply required for polymerase chain reaction (PCR) or digestion. This new protocol is helpful for amplification of genes of interest in early-stage research projects and for low throughput screening of transformants. It is more reliable than colony PCR of Synechocystis cultures, and less involved and cheaper than existing clean-DNA preparation methods. It represents an unusually simple and reliable extraction protocol for the growing body of research making use of this cyanobacterium. Oxford University Press 2020-06-13 /pmc/articles/PMC7474859/ /pubmed/32913895 http://dx.doi.org/10.1093/biomethods/bpaa011 Text en © The Author(s) 2020. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Methods Manuscript
Harrison, Dale J A
Thompson, Elinor P
A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis
title A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis
title_full A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis
title_fullStr A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis
title_full_unstemmed A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis
title_short A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis
title_sort rapid and low-cost method for genomic dna extraction from the cyanobacterium synechocystis
topic Methods Manuscript
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7474859/
https://www.ncbi.nlm.nih.gov/pubmed/32913895
http://dx.doi.org/10.1093/biomethods/bpaa011
work_keys_str_mv AT harrisondaleja arapidandlowcostmethodforgenomicdnaextractionfromthecyanobacteriumsynechocystis
AT thompsonelinorp arapidandlowcostmethodforgenomicdnaextractionfromthecyanobacteriumsynechocystis
AT harrisondaleja rapidandlowcostmethodforgenomicdnaextractionfromthecyanobacteriumsynechocystis
AT thompsonelinorp rapidandlowcostmethodforgenomicdnaextractionfromthecyanobacteriumsynechocystis