Cargando…
A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis
A two-step method is reported for preparation of genomic DNA from the model cyanobacterium Synechocystis that can be performed with minimal equipment and reagents in about an hour. High yields of genetic material can be obtained (200–450 ng/μl) with reasonable purity. A further ethanol precipitation...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7474859/ https://www.ncbi.nlm.nih.gov/pubmed/32913895 http://dx.doi.org/10.1093/biomethods/bpaa011 |
_version_ | 1783579403941314560 |
---|---|
author | Harrison, Dale J A Thompson, Elinor P |
author_facet | Harrison, Dale J A Thompson, Elinor P |
author_sort | Harrison, Dale J A |
collection | PubMed |
description | A two-step method is reported for preparation of genomic DNA from the model cyanobacterium Synechocystis that can be performed with minimal equipment and reagents in about an hour. High yields of genetic material can be obtained (200–450 ng/μl) with reasonable purity. A further ethanol precipitation step can be included but is not necessary if template is simply required for polymerase chain reaction (PCR) or digestion. This new protocol is helpful for amplification of genes of interest in early-stage research projects and for low throughput screening of transformants. It is more reliable than colony PCR of Synechocystis cultures, and less involved and cheaper than existing clean-DNA preparation methods. It represents an unusually simple and reliable extraction protocol for the growing body of research making use of this cyanobacterium. |
format | Online Article Text |
id | pubmed-7474859 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-74748592020-09-09 A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis Harrison, Dale J A Thompson, Elinor P Biol Methods Protoc Methods Manuscript A two-step method is reported for preparation of genomic DNA from the model cyanobacterium Synechocystis that can be performed with minimal equipment and reagents in about an hour. High yields of genetic material can be obtained (200–450 ng/μl) with reasonable purity. A further ethanol precipitation step can be included but is not necessary if template is simply required for polymerase chain reaction (PCR) or digestion. This new protocol is helpful for amplification of genes of interest in early-stage research projects and for low throughput screening of transformants. It is more reliable than colony PCR of Synechocystis cultures, and less involved and cheaper than existing clean-DNA preparation methods. It represents an unusually simple and reliable extraction protocol for the growing body of research making use of this cyanobacterium. Oxford University Press 2020-06-13 /pmc/articles/PMC7474859/ /pubmed/32913895 http://dx.doi.org/10.1093/biomethods/bpaa011 Text en © The Author(s) 2020. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Methods Manuscript Harrison, Dale J A Thompson, Elinor P A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis |
title | A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis |
title_full | A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis |
title_fullStr | A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis |
title_full_unstemmed | A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis |
title_short | A rapid and low-cost method for genomic DNA extraction from the cyanobacterium Synechocystis |
title_sort | rapid and low-cost method for genomic dna extraction from the cyanobacterium synechocystis |
topic | Methods Manuscript |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7474859/ https://www.ncbi.nlm.nih.gov/pubmed/32913895 http://dx.doi.org/10.1093/biomethods/bpaa011 |
work_keys_str_mv | AT harrisondaleja arapidandlowcostmethodforgenomicdnaextractionfromthecyanobacteriumsynechocystis AT thompsonelinorp arapidandlowcostmethodforgenomicdnaextractionfromthecyanobacteriumsynechocystis AT harrisondaleja rapidandlowcostmethodforgenomicdnaextractionfromthecyanobacteriumsynechocystis AT thompsonelinorp rapidandlowcostmethodforgenomicdnaextractionfromthecyanobacteriumsynechocystis |