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Development of spectral decomposition based on Bayesian information criterion with estimation of confidence interval
We develop an automatic peak fitting algorithm using the Bayesian information criterion (BIC) fitting method with confidence-interval estimation in spectral decomposition. First, spectral decomposition is carried out by adopting the Bayesian exchange Monte Carlo method for various artificial spectra...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7476551/ https://www.ncbi.nlm.nih.gov/pubmed/32939165 http://dx.doi.org/10.1080/14686996.2020.1773210 |
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author | Shinotsuka, Hiroshi Nagata, Kenji Yoshikawa, Hideki Mototake, Yoh-Ichi Shouno, Hayaru Okada, Masato |
author_facet | Shinotsuka, Hiroshi Nagata, Kenji Yoshikawa, Hideki Mototake, Yoh-Ichi Shouno, Hayaru Okada, Masato |
author_sort | Shinotsuka, Hiroshi |
collection | PubMed |
description | We develop an automatic peak fitting algorithm using the Bayesian information criterion (BIC) fitting method with confidence-interval estimation in spectral decomposition. First, spectral decomposition is carried out by adopting the Bayesian exchange Monte Carlo method for various artificial spectral data, and the confidence interval of fitting parameters is evaluated. From the results, an approximated model formula that expresses the confidence interval of parameters and the relationship between the peak-to-peak distance and the signal-to-noise ratio is derived. Next, for real spectral data, we compare the confidence interval of each peak parameter obtained using the Bayesian exchange Monte Carlo method with the confidence interval obtained from the BIC-fitting with the model selection function and the proposed approximated formula. We thus confirm that the parameter confidence intervals obtained using the two methods agree well. It is therefore possible to not only simply estimate the appropriate number of peaks by BIC-fitting but also obtain the confidence interval of fitting parameters. |
format | Online Article Text |
id | pubmed-7476551 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-74765512020-09-15 Development of spectral decomposition based on Bayesian information criterion with estimation of confidence interval Shinotsuka, Hiroshi Nagata, Kenji Yoshikawa, Hideki Mototake, Yoh-Ichi Shouno, Hayaru Okada, Masato Sci Technol Adv Mater New topics/Others We develop an automatic peak fitting algorithm using the Bayesian information criterion (BIC) fitting method with confidence-interval estimation in spectral decomposition. First, spectral decomposition is carried out by adopting the Bayesian exchange Monte Carlo method for various artificial spectral data, and the confidence interval of fitting parameters is evaluated. From the results, an approximated model formula that expresses the confidence interval of parameters and the relationship between the peak-to-peak distance and the signal-to-noise ratio is derived. Next, for real spectral data, we compare the confidence interval of each peak parameter obtained using the Bayesian exchange Monte Carlo method with the confidence interval obtained from the BIC-fitting with the model selection function and the proposed approximated formula. We thus confirm that the parameter confidence intervals obtained using the two methods agree well. It is therefore possible to not only simply estimate the appropriate number of peaks by BIC-fitting but also obtain the confidence interval of fitting parameters. Taylor & Francis 2020-07-02 /pmc/articles/PMC7476551/ /pubmed/32939165 http://dx.doi.org/10.1080/14686996.2020.1773210 Text en © 2020 The Author(s). Published by National Institute for Materials Science in partnership with Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | New topics/Others Shinotsuka, Hiroshi Nagata, Kenji Yoshikawa, Hideki Mototake, Yoh-Ichi Shouno, Hayaru Okada, Masato Development of spectral decomposition based on Bayesian information criterion with estimation of confidence interval |
title | Development of spectral decomposition based on Bayesian information criterion with estimation of confidence interval |
title_full | Development of spectral decomposition based on Bayesian information criterion with estimation of confidence interval |
title_fullStr | Development of spectral decomposition based on Bayesian information criterion with estimation of confidence interval |
title_full_unstemmed | Development of spectral decomposition based on Bayesian information criterion with estimation of confidence interval |
title_short | Development of spectral decomposition based on Bayesian information criterion with estimation of confidence interval |
title_sort | development of spectral decomposition based on bayesian information criterion with estimation of confidence interval |
topic | New topics/Others |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7476551/ https://www.ncbi.nlm.nih.gov/pubmed/32939165 http://dx.doi.org/10.1080/14686996.2020.1773210 |
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