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A novel seven-gene signature as Prognostic Biomarker in Hepatocellular Carcinoma
Purpose: Our study is designed to develop and certify a promising prognostic signature for hepatocellular carcinoma (HCC). Materials and methods: We retrospectively analyzed mRNA expression profiles and clinicopathological data fetched from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7477431/ https://www.ncbi.nlm.nih.gov/pubmed/32913470 http://dx.doi.org/10.7150/jca.44573 |
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author | Xie, Hui Liu, Shouping Zhang, Ziying Chen, Peng Tao, Yongguang |
author_facet | Xie, Hui Liu, Shouping Zhang, Ziying Chen, Peng Tao, Yongguang |
author_sort | Xie, Hui |
collection | PubMed |
description | Purpose: Our study is designed to develop and certify a promising prognostic signature for hepatocellular carcinoma (HCC). Materials and methods: We retrospectively analyzed mRNA expression profiles and clinicopathological data fetched from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) datasets. We formulated a prognostic seven-gene signature composed of differentially expressed mRNAs (DEmRNAs) between HCC and nonneoplastic tissues through univariate Cox regression analysis. The receiver operating characteristic (ROC) curve, survival analysis and multivariate Cox regression analysis as well as nomograms were utilized to assess the prognostic performance of the seven-gene signature. Results: The risk score based on a seven-gene signature categorized HCC subjects into a high- and low-risk group. There was significantly discrepant overall survival (OS) between patients in both groups and the corresponding ROC curve revealed a satisfactory predictive performance in HCC survival in both TCGA and GSE76427 cohort. Multivariate Cox regression analysis demonstrated that a seven-gene signature was an independently prognostic factor for HCC. Nomograms combining this prognostic signature with significant clinical characteristics conferred a crucial reference to predict the 1-,3- and 5 years OS. Conclusions: Our study defined a promising seven-gene signature and nomogram model to forecast the OS of HCC patients, which is instrumental in clinical decision and personalized therapy. |
format | Online Article Text |
id | pubmed-7477431 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-74774312020-09-09 A novel seven-gene signature as Prognostic Biomarker in Hepatocellular Carcinoma Xie, Hui Liu, Shouping Zhang, Ziying Chen, Peng Tao, Yongguang J Cancer Research Paper Purpose: Our study is designed to develop and certify a promising prognostic signature for hepatocellular carcinoma (HCC). Materials and methods: We retrospectively analyzed mRNA expression profiles and clinicopathological data fetched from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) datasets. We formulated a prognostic seven-gene signature composed of differentially expressed mRNAs (DEmRNAs) between HCC and nonneoplastic tissues through univariate Cox regression analysis. The receiver operating characteristic (ROC) curve, survival analysis and multivariate Cox regression analysis as well as nomograms were utilized to assess the prognostic performance of the seven-gene signature. Results: The risk score based on a seven-gene signature categorized HCC subjects into a high- and low-risk group. There was significantly discrepant overall survival (OS) between patients in both groups and the corresponding ROC curve revealed a satisfactory predictive performance in HCC survival in both TCGA and GSE76427 cohort. Multivariate Cox regression analysis demonstrated that a seven-gene signature was an independently prognostic factor for HCC. Nomograms combining this prognostic signature with significant clinical characteristics conferred a crucial reference to predict the 1-,3- and 5 years OS. Conclusions: Our study defined a promising seven-gene signature and nomogram model to forecast the OS of HCC patients, which is instrumental in clinical decision and personalized therapy. Ivyspring International Publisher 2020-07-31 /pmc/articles/PMC7477431/ /pubmed/32913470 http://dx.doi.org/10.7150/jca.44573 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Xie, Hui Liu, Shouping Zhang, Ziying Chen, Peng Tao, Yongguang A novel seven-gene signature as Prognostic Biomarker in Hepatocellular Carcinoma |
title | A novel seven-gene signature as Prognostic Biomarker in Hepatocellular Carcinoma |
title_full | A novel seven-gene signature as Prognostic Biomarker in Hepatocellular Carcinoma |
title_fullStr | A novel seven-gene signature as Prognostic Biomarker in Hepatocellular Carcinoma |
title_full_unstemmed | A novel seven-gene signature as Prognostic Biomarker in Hepatocellular Carcinoma |
title_short | A novel seven-gene signature as Prognostic Biomarker in Hepatocellular Carcinoma |
title_sort | novel seven-gene signature as prognostic biomarker in hepatocellular carcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7477431/ https://www.ncbi.nlm.nih.gov/pubmed/32913470 http://dx.doi.org/10.7150/jca.44573 |
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