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Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis

Sialic acid-binding immunoglobulin-like lectin 15 (Siglec-15) is considered a novel anti-tumor target comparable to programmed cell death 1 ligand 1(PD-L1). However, little is known about Siglec-15. Our study aims to understand its expression signature, prognosis value, immune infiltration pattern,...

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Autores principales: Li, Baihui, Zhang, Bailu, Wang, Xuezhou, Zeng, Ziqing, Huang, Ziqi, Zhang, Lin, Wei, Feng, Ren, Xiubao, Yang, Lili
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7480813/
https://www.ncbi.nlm.nih.gov/pubmed/32939323
http://dx.doi.org/10.1080/2162402X.2020.1807291
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author Li, Baihui
Zhang, Bailu
Wang, Xuezhou
Zeng, Ziqing
Huang, Ziqi
Zhang, Lin
Wei, Feng
Ren, Xiubao
Yang, Lili
author_facet Li, Baihui
Zhang, Bailu
Wang, Xuezhou
Zeng, Ziqing
Huang, Ziqi
Zhang, Lin
Wei, Feng
Ren, Xiubao
Yang, Lili
author_sort Li, Baihui
collection PubMed
description Sialic acid-binding immunoglobulin-like lectin 15 (Siglec-15) is considered a novel anti-tumor target comparable to programmed cell death 1 ligand 1(PD-L1). However, little is known about Siglec-15. Our study aims to understand its expression signature, prognosis value, immune infiltration pattern, and biological function using multi-omic bioinformatics from public databases and verify them in lung cancer patients. Integrated analysis of The Cancer Genome Atlas and Genotype-Tissue Expression portals showed Siglec-15 was overexpressed across cancers. Genetic and epigenetic alteration analysis was performed using cBioportal and UALCAN, showed Siglec-15 was regulated at the genetic and epigenetic levels. Survival estimated using Kaplan–Meier plotter indicated high Siglec-15 expression correlated with favorable or unfavorable outcomes depending on the different type and subtype of cancer. Components of immune microenvironment were analyzed using CIBERSORT, and the correlation between immune cells and Siglec-15 was found to be distinct across cancer types. Based on Gene Set Enrichment Analysis, Siglec-15 was implicated in pathways involved in immunity, metabolism, cancer, and infectious diseases. Lung cancer patients with positive Siglec-15 expression showed significantly short survival rates in progression-free survival concomitant with reduced infiltration of CD20 + B, and dendritic cells by immunohistochemistry. Quantitative real-time PCR results indicated the overexpression of Siglec-15 was correlated with activation of the chemokine signaling pathway. In conclusion, Siglec-15 could serve as a vital prognostic biomarker and play an immune-regulatory role in tumors. These results provide us with clues to better understand Siglec-15 from the perspective of bioinformatics and highlight the importance of Siglec-15 in many types of cancer.
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spelling pubmed-74808132020-09-15 Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis Li, Baihui Zhang, Bailu Wang, Xuezhou Zeng, Ziqing Huang, Ziqi Zhang, Lin Wei, Feng Ren, Xiubao Yang, Lili Oncoimmunology Original Research Sialic acid-binding immunoglobulin-like lectin 15 (Siglec-15) is considered a novel anti-tumor target comparable to programmed cell death 1 ligand 1(PD-L1). However, little is known about Siglec-15. Our study aims to understand its expression signature, prognosis value, immune infiltration pattern, and biological function using multi-omic bioinformatics from public databases and verify them in lung cancer patients. Integrated analysis of The Cancer Genome Atlas and Genotype-Tissue Expression portals showed Siglec-15 was overexpressed across cancers. Genetic and epigenetic alteration analysis was performed using cBioportal and UALCAN, showed Siglec-15 was regulated at the genetic and epigenetic levels. Survival estimated using Kaplan–Meier plotter indicated high Siglec-15 expression correlated with favorable or unfavorable outcomes depending on the different type and subtype of cancer. Components of immune microenvironment were analyzed using CIBERSORT, and the correlation between immune cells and Siglec-15 was found to be distinct across cancer types. Based on Gene Set Enrichment Analysis, Siglec-15 was implicated in pathways involved in immunity, metabolism, cancer, and infectious diseases. Lung cancer patients with positive Siglec-15 expression showed significantly short survival rates in progression-free survival concomitant with reduced infiltration of CD20 + B, and dendritic cells by immunohistochemistry. Quantitative real-time PCR results indicated the overexpression of Siglec-15 was correlated with activation of the chemokine signaling pathway. In conclusion, Siglec-15 could serve as a vital prognostic biomarker and play an immune-regulatory role in tumors. These results provide us with clues to better understand Siglec-15 from the perspective of bioinformatics and highlight the importance of Siglec-15 in many types of cancer. Taylor & Francis 2020-08-28 /pmc/articles/PMC7480813/ /pubmed/32939323 http://dx.doi.org/10.1080/2162402X.2020.1807291 Text en © 2020 The Author(s). Published with license by Taylor & Francis Group, LLC. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Li, Baihui
Zhang, Bailu
Wang, Xuezhou
Zeng, Ziqing
Huang, Ziqi
Zhang, Lin
Wei, Feng
Ren, Xiubao
Yang, Lili
Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis
title Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis
title_full Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis
title_fullStr Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis
title_full_unstemmed Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis
title_short Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis
title_sort expression signature, prognosis value, and immune characteristics of siglec-15 identified by pan-cancer analysis
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7480813/
https://www.ncbi.nlm.nih.gov/pubmed/32939323
http://dx.doi.org/10.1080/2162402X.2020.1807291
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