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Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis
Sialic acid-binding immunoglobulin-like lectin 15 (Siglec-15) is considered a novel anti-tumor target comparable to programmed cell death 1 ligand 1(PD-L1). However, little is known about Siglec-15. Our study aims to understand its expression signature, prognosis value, immune infiltration pattern,...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7480813/ https://www.ncbi.nlm.nih.gov/pubmed/32939323 http://dx.doi.org/10.1080/2162402X.2020.1807291 |
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author | Li, Baihui Zhang, Bailu Wang, Xuezhou Zeng, Ziqing Huang, Ziqi Zhang, Lin Wei, Feng Ren, Xiubao Yang, Lili |
author_facet | Li, Baihui Zhang, Bailu Wang, Xuezhou Zeng, Ziqing Huang, Ziqi Zhang, Lin Wei, Feng Ren, Xiubao Yang, Lili |
author_sort | Li, Baihui |
collection | PubMed |
description | Sialic acid-binding immunoglobulin-like lectin 15 (Siglec-15) is considered a novel anti-tumor target comparable to programmed cell death 1 ligand 1(PD-L1). However, little is known about Siglec-15. Our study aims to understand its expression signature, prognosis value, immune infiltration pattern, and biological function using multi-omic bioinformatics from public databases and verify them in lung cancer patients. Integrated analysis of The Cancer Genome Atlas and Genotype-Tissue Expression portals showed Siglec-15 was overexpressed across cancers. Genetic and epigenetic alteration analysis was performed using cBioportal and UALCAN, showed Siglec-15 was regulated at the genetic and epigenetic levels. Survival estimated using Kaplan–Meier plotter indicated high Siglec-15 expression correlated with favorable or unfavorable outcomes depending on the different type and subtype of cancer. Components of immune microenvironment were analyzed using CIBERSORT, and the correlation between immune cells and Siglec-15 was found to be distinct across cancer types. Based on Gene Set Enrichment Analysis, Siglec-15 was implicated in pathways involved in immunity, metabolism, cancer, and infectious diseases. Lung cancer patients with positive Siglec-15 expression showed significantly short survival rates in progression-free survival concomitant with reduced infiltration of CD20 + B, and dendritic cells by immunohistochemistry. Quantitative real-time PCR results indicated the overexpression of Siglec-15 was correlated with activation of the chemokine signaling pathway. In conclusion, Siglec-15 could serve as a vital prognostic biomarker and play an immune-regulatory role in tumors. These results provide us with clues to better understand Siglec-15 from the perspective of bioinformatics and highlight the importance of Siglec-15 in many types of cancer. |
format | Online Article Text |
id | pubmed-7480813 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-74808132020-09-15 Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis Li, Baihui Zhang, Bailu Wang, Xuezhou Zeng, Ziqing Huang, Ziqi Zhang, Lin Wei, Feng Ren, Xiubao Yang, Lili Oncoimmunology Original Research Sialic acid-binding immunoglobulin-like lectin 15 (Siglec-15) is considered a novel anti-tumor target comparable to programmed cell death 1 ligand 1(PD-L1). However, little is known about Siglec-15. Our study aims to understand its expression signature, prognosis value, immune infiltration pattern, and biological function using multi-omic bioinformatics from public databases and verify them in lung cancer patients. Integrated analysis of The Cancer Genome Atlas and Genotype-Tissue Expression portals showed Siglec-15 was overexpressed across cancers. Genetic and epigenetic alteration analysis was performed using cBioportal and UALCAN, showed Siglec-15 was regulated at the genetic and epigenetic levels. Survival estimated using Kaplan–Meier plotter indicated high Siglec-15 expression correlated with favorable or unfavorable outcomes depending on the different type and subtype of cancer. Components of immune microenvironment were analyzed using CIBERSORT, and the correlation between immune cells and Siglec-15 was found to be distinct across cancer types. Based on Gene Set Enrichment Analysis, Siglec-15 was implicated in pathways involved in immunity, metabolism, cancer, and infectious diseases. Lung cancer patients with positive Siglec-15 expression showed significantly short survival rates in progression-free survival concomitant with reduced infiltration of CD20 + B, and dendritic cells by immunohistochemistry. Quantitative real-time PCR results indicated the overexpression of Siglec-15 was correlated with activation of the chemokine signaling pathway. In conclusion, Siglec-15 could serve as a vital prognostic biomarker and play an immune-regulatory role in tumors. These results provide us with clues to better understand Siglec-15 from the perspective of bioinformatics and highlight the importance of Siglec-15 in many types of cancer. Taylor & Francis 2020-08-28 /pmc/articles/PMC7480813/ /pubmed/32939323 http://dx.doi.org/10.1080/2162402X.2020.1807291 Text en © 2020 The Author(s). Published with license by Taylor & Francis Group, LLC. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Li, Baihui Zhang, Bailu Wang, Xuezhou Zeng, Ziqing Huang, Ziqi Zhang, Lin Wei, Feng Ren, Xiubao Yang, Lili Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis |
title | Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis |
title_full | Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis |
title_fullStr | Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis |
title_full_unstemmed | Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis |
title_short | Expression signature, prognosis value, and immune characteristics of Siglec-15 identified by pan-cancer analysis |
title_sort | expression signature, prognosis value, and immune characteristics of siglec-15 identified by pan-cancer analysis |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7480813/ https://www.ncbi.nlm.nih.gov/pubmed/32939323 http://dx.doi.org/10.1080/2162402X.2020.1807291 |
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