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Data-driven identification of reliable sensor species to predict regime shifts in ecological networks
Signals of critical slowing down are useful for predicting impending transitions in ecosystems. However, in a system with complex interacting components not all components provide the same quality of information to detect system-wide transitions. Identifying the best indicator species in complex eco...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7481725/ https://www.ncbi.nlm.nih.gov/pubmed/32968532 http://dx.doi.org/10.1098/rsos.200896 |
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author | Ghadami, Amin Chen, Shiyang Epureanu, Bogdan I. |
author_facet | Ghadami, Amin Chen, Shiyang Epureanu, Bogdan I. |
author_sort | Ghadami, Amin |
collection | PubMed |
description | Signals of critical slowing down are useful for predicting impending transitions in ecosystems. However, in a system with complex interacting components not all components provide the same quality of information to detect system-wide transitions. Identifying the best indicator species in complex ecosystems is a challenging task when a model of the system is not available. In this paper, we propose a data-driven approach to rank the elements of a spatially distributed ecosystem based on their reliability in providing early-warning signals of critical transitions. The proposed method is rooted in experimental modal analysis techniques traditionally used to identify structural dynamical systems. We show that one could use natural system fluctuations and the system responses to small perturbations to reveal the slowest direction of the system dynamics and identify indicator regions that are best suited for detecting abrupt transitions in a network of interacting components. The approach is applied to several ecosystems to demonstrate how it successfully ranks regions based on their reliability to provide early-warning signals of regime shifts. The significance of identifying the indicator species and the challenges associated with ranking nodes in networks of interacting components are also discussed. |
format | Online Article Text |
id | pubmed-7481725 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-74817252020-09-22 Data-driven identification of reliable sensor species to predict regime shifts in ecological networks Ghadami, Amin Chen, Shiyang Epureanu, Bogdan I. R Soc Open Sci Ecology, Conservation, and Global Change Biology Signals of critical slowing down are useful for predicting impending transitions in ecosystems. However, in a system with complex interacting components not all components provide the same quality of information to detect system-wide transitions. Identifying the best indicator species in complex ecosystems is a challenging task when a model of the system is not available. In this paper, we propose a data-driven approach to rank the elements of a spatially distributed ecosystem based on their reliability in providing early-warning signals of critical transitions. The proposed method is rooted in experimental modal analysis techniques traditionally used to identify structural dynamical systems. We show that one could use natural system fluctuations and the system responses to small perturbations to reveal the slowest direction of the system dynamics and identify indicator regions that are best suited for detecting abrupt transitions in a network of interacting components. The approach is applied to several ecosystems to demonstrate how it successfully ranks regions based on their reliability to provide early-warning signals of regime shifts. The significance of identifying the indicator species and the challenges associated with ranking nodes in networks of interacting components are also discussed. The Royal Society 2020-08-12 /pmc/articles/PMC7481725/ /pubmed/32968532 http://dx.doi.org/10.1098/rsos.200896 Text en © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Ecology, Conservation, and Global Change Biology Ghadami, Amin Chen, Shiyang Epureanu, Bogdan I. Data-driven identification of reliable sensor species to predict regime shifts in ecological networks |
title | Data-driven identification of reliable sensor species to predict regime shifts in ecological networks |
title_full | Data-driven identification of reliable sensor species to predict regime shifts in ecological networks |
title_fullStr | Data-driven identification of reliable sensor species to predict regime shifts in ecological networks |
title_full_unstemmed | Data-driven identification of reliable sensor species to predict regime shifts in ecological networks |
title_short | Data-driven identification of reliable sensor species to predict regime shifts in ecological networks |
title_sort | data-driven identification of reliable sensor species to predict regime shifts in ecological networks |
topic | Ecology, Conservation, and Global Change Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7481725/ https://www.ncbi.nlm.nih.gov/pubmed/32968532 http://dx.doi.org/10.1098/rsos.200896 |
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