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Genome-Wide Mining of Wheat DUF966 Gene Family Provides New Insights Into Salt Stress Responses
Domain of unknown function (DUF) proteins constitute a great deal of families of functionally uncharacterized proteins in eukaryotes. The DUF966 gene family is found in monocotyledons, dicotyledons, mosses, and other species. However, little is known about the functions of DUF966 genes in wheat (Tri...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7483657/ https://www.ncbi.nlm.nih.gov/pubmed/32983219 http://dx.doi.org/10.3389/fpls.2020.569838 |
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author | Zhou, Xiaoyi Zhu, Xiaoguo Shao, Wenna Song, Jinghan Jiang, Wenqiang He, Yiqin Yin, Junliang Ma, Dongfang Qiao, Yongli |
author_facet | Zhou, Xiaoyi Zhu, Xiaoguo Shao, Wenna Song, Jinghan Jiang, Wenqiang He, Yiqin Yin, Junliang Ma, Dongfang Qiao, Yongli |
author_sort | Zhou, Xiaoyi |
collection | PubMed |
description | Domain of unknown function (DUF) proteins constitute a great deal of families of functionally uncharacterized proteins in eukaryotes. The DUF966 gene family is found in monocotyledons, dicotyledons, mosses, and other species. However, little is known about the functions of DUF966 genes in wheat (Triticum aestivum L.). In this study, we identified and characterized the TaDUF966 gene family members in wheat by in silico analysis. A total of 28 TaDUF966 proteins were identified in wheat. Phylogenetic analysis divided these proteins into two groups (Groups I and II). Proteins in each group showed a highly conserved DUF966 domain and conserved motif distribution, implying their functional conservation. Analysis of gene expression profiling data showed that some TaDUF966 genes were induced by salt stress. We further confirmed the role of TaDUF966-9B in salt stress using virus induced gene silencing (VIGS) assay. Compared with the empty vector control, the TaDUF966-9B knockdown plants exhibited severe leaf curling at 10 days post-inoculation with BSMV under salt stress, suggesting that TaDUF966 genes play a vital role in salt stress tolerance in wheat. Taken together, these results expand our knowledge of the evolution of the DUF966 gene family in wheat and promote the potential application of these genes in wheat genetic improvement. |
format | Online Article Text |
id | pubmed-7483657 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-74836572020-09-26 Genome-Wide Mining of Wheat DUF966 Gene Family Provides New Insights Into Salt Stress Responses Zhou, Xiaoyi Zhu, Xiaoguo Shao, Wenna Song, Jinghan Jiang, Wenqiang He, Yiqin Yin, Junliang Ma, Dongfang Qiao, Yongli Front Plant Sci Plant Science Domain of unknown function (DUF) proteins constitute a great deal of families of functionally uncharacterized proteins in eukaryotes. The DUF966 gene family is found in monocotyledons, dicotyledons, mosses, and other species. However, little is known about the functions of DUF966 genes in wheat (Triticum aestivum L.). In this study, we identified and characterized the TaDUF966 gene family members in wheat by in silico analysis. A total of 28 TaDUF966 proteins were identified in wheat. Phylogenetic analysis divided these proteins into two groups (Groups I and II). Proteins in each group showed a highly conserved DUF966 domain and conserved motif distribution, implying their functional conservation. Analysis of gene expression profiling data showed that some TaDUF966 genes were induced by salt stress. We further confirmed the role of TaDUF966-9B in salt stress using virus induced gene silencing (VIGS) assay. Compared with the empty vector control, the TaDUF966-9B knockdown plants exhibited severe leaf curling at 10 days post-inoculation with BSMV under salt stress, suggesting that TaDUF966 genes play a vital role in salt stress tolerance in wheat. Taken together, these results expand our knowledge of the evolution of the DUF966 gene family in wheat and promote the potential application of these genes in wheat genetic improvement. Frontiers Media S.A. 2020-08-28 /pmc/articles/PMC7483657/ /pubmed/32983219 http://dx.doi.org/10.3389/fpls.2020.569838 Text en Copyright © 2020 Zhou, Zhu, Shao, Song, Jiang, He, Yin, Ma and Qiao http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Zhou, Xiaoyi Zhu, Xiaoguo Shao, Wenna Song, Jinghan Jiang, Wenqiang He, Yiqin Yin, Junliang Ma, Dongfang Qiao, Yongli Genome-Wide Mining of Wheat DUF966 Gene Family Provides New Insights Into Salt Stress Responses |
title | Genome-Wide Mining of Wheat DUF966 Gene Family Provides New Insights Into Salt Stress Responses |
title_full | Genome-Wide Mining of Wheat DUF966 Gene Family Provides New Insights Into Salt Stress Responses |
title_fullStr | Genome-Wide Mining of Wheat DUF966 Gene Family Provides New Insights Into Salt Stress Responses |
title_full_unstemmed | Genome-Wide Mining of Wheat DUF966 Gene Family Provides New Insights Into Salt Stress Responses |
title_short | Genome-Wide Mining of Wheat DUF966 Gene Family Provides New Insights Into Salt Stress Responses |
title_sort | genome-wide mining of wheat duf966 gene family provides new insights into salt stress responses |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7483657/ https://www.ncbi.nlm.nih.gov/pubmed/32983219 http://dx.doi.org/10.3389/fpls.2020.569838 |
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