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Catalytic specificity of the Lactobacillus plantarum cystathionine γ-lyase presumed by the crystallographic analysis
The reverse transsulfuration pathway, which is composed of cystathionine β-synthase (CBS) and cystathionine γ-lyase (CGL), plays a role to synthesize l-cysteine using l-serine and the sulfur atom in l-methionine. A plant-derived lactic acid bacterium Lactobacillus plantarum SN35N has been previously...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7483736/ https://www.ncbi.nlm.nih.gov/pubmed/32913258 http://dx.doi.org/10.1038/s41598-020-71756-7 |
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author | Matoba, Yasuyuki Noda, Masafumi Yoshida, Tomoki Oda, Kosuke Ezumi, Yuka Yasutake, Chiaki Izuhara-Kihara, Hisae Danshiitsoodol, Narandarai Kumagai, Takanori Sugiyama, Masanori |
author_facet | Matoba, Yasuyuki Noda, Masafumi Yoshida, Tomoki Oda, Kosuke Ezumi, Yuka Yasutake, Chiaki Izuhara-Kihara, Hisae Danshiitsoodol, Narandarai Kumagai, Takanori Sugiyama, Masanori |
author_sort | Matoba, Yasuyuki |
collection | PubMed |
description | The reverse transsulfuration pathway, which is composed of cystathionine β-synthase (CBS) and cystathionine γ-lyase (CGL), plays a role to synthesize l-cysteine using l-serine and the sulfur atom in l-methionine. A plant-derived lactic acid bacterium Lactobacillus plantarum SN35N has been previously found to harbor the gene cluster encoding the CBS- and CGL-like enzymes. In addition, it has been demonstrated that the L. plantarum CBS can synthesize cystathionine from O-acetyl-l-serine and l-homocysteine. The aim of this study is to characterize the enzymatic functions of the L. plantarum CGL. We have found that the enzyme has the high γ-lyase activity toward cystathionine to generate l-cysteine, together with the β-lyase activity toward l-cystine to generate l-cysteine persulfide. By the crystallographic analysis of the inactive CGL K194A mutant complexed with cystathionine, we have found the residues which recognize the distal amino and carboxyl groups of cystathionine or l-cystine. The PLP-bound substrates at the active site may take either the binding pose for the γ- or β-elimination reaction, with the former being the major reaction in the case of cystathionine. |
format | Online Article Text |
id | pubmed-7483736 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-74837362020-09-15 Catalytic specificity of the Lactobacillus plantarum cystathionine γ-lyase presumed by the crystallographic analysis Matoba, Yasuyuki Noda, Masafumi Yoshida, Tomoki Oda, Kosuke Ezumi, Yuka Yasutake, Chiaki Izuhara-Kihara, Hisae Danshiitsoodol, Narandarai Kumagai, Takanori Sugiyama, Masanori Sci Rep Article The reverse transsulfuration pathway, which is composed of cystathionine β-synthase (CBS) and cystathionine γ-lyase (CGL), plays a role to synthesize l-cysteine using l-serine and the sulfur atom in l-methionine. A plant-derived lactic acid bacterium Lactobacillus plantarum SN35N has been previously found to harbor the gene cluster encoding the CBS- and CGL-like enzymes. In addition, it has been demonstrated that the L. plantarum CBS can synthesize cystathionine from O-acetyl-l-serine and l-homocysteine. The aim of this study is to characterize the enzymatic functions of the L. plantarum CGL. We have found that the enzyme has the high γ-lyase activity toward cystathionine to generate l-cysteine, together with the β-lyase activity toward l-cystine to generate l-cysteine persulfide. By the crystallographic analysis of the inactive CGL K194A mutant complexed with cystathionine, we have found the residues which recognize the distal amino and carboxyl groups of cystathionine or l-cystine. The PLP-bound substrates at the active site may take either the binding pose for the γ- or β-elimination reaction, with the former being the major reaction in the case of cystathionine. Nature Publishing Group UK 2020-09-10 /pmc/articles/PMC7483736/ /pubmed/32913258 http://dx.doi.org/10.1038/s41598-020-71756-7 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Matoba, Yasuyuki Noda, Masafumi Yoshida, Tomoki Oda, Kosuke Ezumi, Yuka Yasutake, Chiaki Izuhara-Kihara, Hisae Danshiitsoodol, Narandarai Kumagai, Takanori Sugiyama, Masanori Catalytic specificity of the Lactobacillus plantarum cystathionine γ-lyase presumed by the crystallographic analysis |
title | Catalytic specificity of the Lactobacillus plantarum cystathionine γ-lyase presumed by the crystallographic analysis |
title_full | Catalytic specificity of the Lactobacillus plantarum cystathionine γ-lyase presumed by the crystallographic analysis |
title_fullStr | Catalytic specificity of the Lactobacillus plantarum cystathionine γ-lyase presumed by the crystallographic analysis |
title_full_unstemmed | Catalytic specificity of the Lactobacillus plantarum cystathionine γ-lyase presumed by the crystallographic analysis |
title_short | Catalytic specificity of the Lactobacillus plantarum cystathionine γ-lyase presumed by the crystallographic analysis |
title_sort | catalytic specificity of the lactobacillus plantarum cystathionine γ-lyase presumed by the crystallographic analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7483736/ https://www.ncbi.nlm.nih.gov/pubmed/32913258 http://dx.doi.org/10.1038/s41598-020-71756-7 |
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