Cargando…

Alpine Snow Algae Microbiome Diversity in the Coast Range of British Columbia

Snow algae blooms contain bacteria, fungi, and other microscopic organisms. We surveyed 55 alpine snow algae blooms, collecting a total of 68 samples, from 12 mountains in the Coast Range of British Columbia, Canada. We used microscopy and rDNA metabarcoding to document biodiversity and query specie...

Descripción completa

Detalles Bibliográficos
Autores principales: Yakimovich, Kurt M., Engstrom, Casey B., Quarmby, Lynne M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7485462/
https://www.ncbi.nlm.nih.gov/pubmed/33013720
http://dx.doi.org/10.3389/fmicb.2020.01721
_version_ 1783581153826963456
author Yakimovich, Kurt M.
Engstrom, Casey B.
Quarmby, Lynne M.
author_facet Yakimovich, Kurt M.
Engstrom, Casey B.
Quarmby, Lynne M.
author_sort Yakimovich, Kurt M.
collection PubMed
description Snow algae blooms contain bacteria, fungi, and other microscopic organisms. We surveyed 55 alpine snow algae blooms, collecting a total of 68 samples, from 12 mountains in the Coast Range of British Columbia, Canada. We used microscopy and rDNA metabarcoding to document biodiversity and query species and taxonomic associations. Across all samples, we found 173 algal, 2,739 bacterial, 380 fungal, and 540 protist/animalia operational taxonomic units (OTUs). In a previous study, we reported that most algal species were distributed along an elevational gradient. In the current study, we were surprised to find no corresponding distribution in any other taxa. We also tested the hypothesis that certain bacterial and fungal taxa co-occur with specific algal taxa. However, despite previous evidence that particular genera co-occur, we found no significant correlations between taxa across our 68 samples. Notably, seven bacterial, one fungal, and two cercozoan OTUs were widely distributed across our study regions. Taken together, these data suggest that any mutualisms with algae may not be taxon specific. We also report evidence of snow algae predation by rotifers, tardigrades, springtails, chytrid fungi, and ciliates, establishing the framework for a complex food web.
format Online
Article
Text
id pubmed-7485462
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-74854622020-10-02 Alpine Snow Algae Microbiome Diversity in the Coast Range of British Columbia Yakimovich, Kurt M. Engstrom, Casey B. Quarmby, Lynne M. Front Microbiol Microbiology Snow algae blooms contain bacteria, fungi, and other microscopic organisms. We surveyed 55 alpine snow algae blooms, collecting a total of 68 samples, from 12 mountains in the Coast Range of British Columbia, Canada. We used microscopy and rDNA metabarcoding to document biodiversity and query species and taxonomic associations. Across all samples, we found 173 algal, 2,739 bacterial, 380 fungal, and 540 protist/animalia operational taxonomic units (OTUs). In a previous study, we reported that most algal species were distributed along an elevational gradient. In the current study, we were surprised to find no corresponding distribution in any other taxa. We also tested the hypothesis that certain bacterial and fungal taxa co-occur with specific algal taxa. However, despite previous evidence that particular genera co-occur, we found no significant correlations between taxa across our 68 samples. Notably, seven bacterial, one fungal, and two cercozoan OTUs were widely distributed across our study regions. Taken together, these data suggest that any mutualisms with algae may not be taxon specific. We also report evidence of snow algae predation by rotifers, tardigrades, springtails, chytrid fungi, and ciliates, establishing the framework for a complex food web. Frontiers Media S.A. 2020-07-28 /pmc/articles/PMC7485462/ /pubmed/33013720 http://dx.doi.org/10.3389/fmicb.2020.01721 Text en Copyright © 2020 Yakimovich, Engstrom and Quarmby. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Yakimovich, Kurt M.
Engstrom, Casey B.
Quarmby, Lynne M.
Alpine Snow Algae Microbiome Diversity in the Coast Range of British Columbia
title Alpine Snow Algae Microbiome Diversity in the Coast Range of British Columbia
title_full Alpine Snow Algae Microbiome Diversity in the Coast Range of British Columbia
title_fullStr Alpine Snow Algae Microbiome Diversity in the Coast Range of British Columbia
title_full_unstemmed Alpine Snow Algae Microbiome Diversity in the Coast Range of British Columbia
title_short Alpine Snow Algae Microbiome Diversity in the Coast Range of British Columbia
title_sort alpine snow algae microbiome diversity in the coast range of british columbia
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7485462/
https://www.ncbi.nlm.nih.gov/pubmed/33013720
http://dx.doi.org/10.3389/fmicb.2020.01721
work_keys_str_mv AT yakimovichkurtm alpinesnowalgaemicrobiomediversityinthecoastrangeofbritishcolumbia
AT engstromcaseyb alpinesnowalgaemicrobiomediversityinthecoastrangeofbritishcolumbia
AT quarmbylynnem alpinesnowalgaemicrobiomediversityinthecoastrangeofbritishcolumbia