Cargando…

Real-World Implications of a Rapidly Responsive COVID-19 Spread Model with Time-Dependent Parameters via Deep Learning: Model Development and Validation

BACKGROUND: The COVID-19 pandemic has caused major disruptions worldwide since March 2020. The experience of the 1918 influenza pandemic demonstrated that decreases in the infection rates of COVID-19 do not guarantee continuity of the trend. OBJECTIVE: The aim of this study was to develop a precise...

Descripción completa

Detalles Bibliográficos
Autores principales: Jung, Se Young, Jo, Hyeontae, Son, Hwijae, Hwang, Hyung Ju
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7486001/
https://www.ncbi.nlm.nih.gov/pubmed/32877350
http://dx.doi.org/10.2196/19907
_version_ 1783581259349360640
author Jung, Se Young
Jo, Hyeontae
Son, Hwijae
Hwang, Hyung Ju
author_facet Jung, Se Young
Jo, Hyeontae
Son, Hwijae
Hwang, Hyung Ju
author_sort Jung, Se Young
collection PubMed
description BACKGROUND: The COVID-19 pandemic has caused major disruptions worldwide since March 2020. The experience of the 1918 influenza pandemic demonstrated that decreases in the infection rates of COVID-19 do not guarantee continuity of the trend. OBJECTIVE: The aim of this study was to develop a precise spread model of COVID-19 with time-dependent parameters via deep learning to respond promptly to the dynamic situation of the outbreak and proactively minimize damage. METHODS: In this study, we investigated a mathematical model with time-dependent parameters via deep learning based on forward-inverse problems. We used data from the Korea Centers for Disease Control and Prevention (KCDC) and the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University for Korea and the other countries, respectively. Because the data consist of confirmed, recovered, and deceased cases, we selected the susceptible-infected-recovered (SIR) model and found approximated solutions as well as model parameters. Specifically, we applied fully connected neural networks to the solutions and parameters and designed suitable loss functions. RESULTS: We developed an entirely new SIR model with time-dependent parameters via deep learning methods. Furthermore, we validated the model with the conventional Runge-Kutta fourth order model to confirm its convergent nature. In addition, we evaluated our model based on the real-world situation reported from the KCDC, the Korean government, and news media. We also crossvalidated our model using data from the CSSE for Italy, Sweden, and the United States. CONCLUSIONS: The methodology and new model of this study could be employed for short-term prediction of COVID-19, which could help the government prepare for a new outbreak. In addition, from the perspective of measuring medical resources, our model has powerful strength because it assumes all the parameters as time-dependent, which reflects the exact status of viral spread.
format Online
Article
Text
id pubmed-7486001
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher JMIR Publications
record_format MEDLINE/PubMed
spelling pubmed-74860012020-09-21 Real-World Implications of a Rapidly Responsive COVID-19 Spread Model with Time-Dependent Parameters via Deep Learning: Model Development and Validation Jung, Se Young Jo, Hyeontae Son, Hwijae Hwang, Hyung Ju J Med Internet Res Original Paper BACKGROUND: The COVID-19 pandemic has caused major disruptions worldwide since March 2020. The experience of the 1918 influenza pandemic demonstrated that decreases in the infection rates of COVID-19 do not guarantee continuity of the trend. OBJECTIVE: The aim of this study was to develop a precise spread model of COVID-19 with time-dependent parameters via deep learning to respond promptly to the dynamic situation of the outbreak and proactively minimize damage. METHODS: In this study, we investigated a mathematical model with time-dependent parameters via deep learning based on forward-inverse problems. We used data from the Korea Centers for Disease Control and Prevention (KCDC) and the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University for Korea and the other countries, respectively. Because the data consist of confirmed, recovered, and deceased cases, we selected the susceptible-infected-recovered (SIR) model and found approximated solutions as well as model parameters. Specifically, we applied fully connected neural networks to the solutions and parameters and designed suitable loss functions. RESULTS: We developed an entirely new SIR model with time-dependent parameters via deep learning methods. Furthermore, we validated the model with the conventional Runge-Kutta fourth order model to confirm its convergent nature. In addition, we evaluated our model based on the real-world situation reported from the KCDC, the Korean government, and news media. We also crossvalidated our model using data from the CSSE for Italy, Sweden, and the United States. CONCLUSIONS: The methodology and new model of this study could be employed for short-term prediction of COVID-19, which could help the government prepare for a new outbreak. In addition, from the perspective of measuring medical resources, our model has powerful strength because it assumes all the parameters as time-dependent, which reflects the exact status of viral spread. JMIR Publications 2020-09-09 /pmc/articles/PMC7486001/ /pubmed/32877350 http://dx.doi.org/10.2196/19907 Text en ©Se Young Jung, Hyeontae Jo, Hwijae Son, Hyung Ju Hwang. Originally published in the Journal of Medical Internet Research (http://www.jmir.org), 09.09.2020. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in the Journal of Medical Internet Research, is properly cited. The complete bibliographic information, a link to the original publication on http://www.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Jung, Se Young
Jo, Hyeontae
Son, Hwijae
Hwang, Hyung Ju
Real-World Implications of a Rapidly Responsive COVID-19 Spread Model with Time-Dependent Parameters via Deep Learning: Model Development and Validation
title Real-World Implications of a Rapidly Responsive COVID-19 Spread Model with Time-Dependent Parameters via Deep Learning: Model Development and Validation
title_full Real-World Implications of a Rapidly Responsive COVID-19 Spread Model with Time-Dependent Parameters via Deep Learning: Model Development and Validation
title_fullStr Real-World Implications of a Rapidly Responsive COVID-19 Spread Model with Time-Dependent Parameters via Deep Learning: Model Development and Validation
title_full_unstemmed Real-World Implications of a Rapidly Responsive COVID-19 Spread Model with Time-Dependent Parameters via Deep Learning: Model Development and Validation
title_short Real-World Implications of a Rapidly Responsive COVID-19 Spread Model with Time-Dependent Parameters via Deep Learning: Model Development and Validation
title_sort real-world implications of a rapidly responsive covid-19 spread model with time-dependent parameters via deep learning: model development and validation
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7486001/
https://www.ncbi.nlm.nih.gov/pubmed/32877350
http://dx.doi.org/10.2196/19907
work_keys_str_mv AT jungseyoung realworldimplicationsofarapidlyresponsivecovid19spreadmodelwithtimedependentparametersviadeeplearningmodeldevelopmentandvalidation
AT johyeontae realworldimplicationsofarapidlyresponsivecovid19spreadmodelwithtimedependentparametersviadeeplearningmodeldevelopmentandvalidation
AT sonhwijae realworldimplicationsofarapidlyresponsivecovid19spreadmodelwithtimedependentparametersviadeeplearningmodeldevelopmentandvalidation
AT hwanghyungju realworldimplicationsofarapidlyresponsivecovid19spreadmodelwithtimedependentparametersviadeeplearningmodeldevelopmentandvalidation