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Ignoring correlated activity causes a failure of retinal population codes
From starlight to sunlight, adaptation alters retinal output, changing both the signal and noise among populations of retinal ganglion cells (RGCs). Here we determine how these light level-dependent changes impact decoding of retinal output, testing the importance of accounting for RGC noise correla...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7490269/ https://www.ncbi.nlm.nih.gov/pubmed/32929073 http://dx.doi.org/10.1038/s41467-020-18436-2 |
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author | Ruda, Kiersten Zylberberg, Joel Field, Greg D. |
author_facet | Ruda, Kiersten Zylberberg, Joel Field, Greg D. |
author_sort | Ruda, Kiersten |
collection | PubMed |
description | From starlight to sunlight, adaptation alters retinal output, changing both the signal and noise among populations of retinal ganglion cells (RGCs). Here we determine how these light level-dependent changes impact decoding of retinal output, testing the importance of accounting for RGC noise correlations to optimally read out retinal activity. We find that at moonlight conditions, correlated noise is greater and assuming independent noise severely diminishes decoding performance. In fact, assuming independence among a local population of RGCs produces worse decoding than using a single RGC, demonstrating a failure of population codes when correlated noise is substantial and ignored. We generalize these results with a simple model to determine what conditions dictate this failure of population processing. This work elucidates the circumstances in which accounting for noise correlations is necessary to take advantage of population-level codes and shows that sensory adaptation can strongly impact decoding requirements on downstream brain areas. |
format | Online Article Text |
id | pubmed-7490269 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-74902692020-09-25 Ignoring correlated activity causes a failure of retinal population codes Ruda, Kiersten Zylberberg, Joel Field, Greg D. Nat Commun Article From starlight to sunlight, adaptation alters retinal output, changing both the signal and noise among populations of retinal ganglion cells (RGCs). Here we determine how these light level-dependent changes impact decoding of retinal output, testing the importance of accounting for RGC noise correlations to optimally read out retinal activity. We find that at moonlight conditions, correlated noise is greater and assuming independent noise severely diminishes decoding performance. In fact, assuming independence among a local population of RGCs produces worse decoding than using a single RGC, demonstrating a failure of population codes when correlated noise is substantial and ignored. We generalize these results with a simple model to determine what conditions dictate this failure of population processing. This work elucidates the circumstances in which accounting for noise correlations is necessary to take advantage of population-level codes and shows that sensory adaptation can strongly impact decoding requirements on downstream brain areas. Nature Publishing Group UK 2020-09-14 /pmc/articles/PMC7490269/ /pubmed/32929073 http://dx.doi.org/10.1038/s41467-020-18436-2 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Ruda, Kiersten Zylberberg, Joel Field, Greg D. Ignoring correlated activity causes a failure of retinal population codes |
title | Ignoring correlated activity causes a failure of retinal population codes |
title_full | Ignoring correlated activity causes a failure of retinal population codes |
title_fullStr | Ignoring correlated activity causes a failure of retinal population codes |
title_full_unstemmed | Ignoring correlated activity causes a failure of retinal population codes |
title_short | Ignoring correlated activity causes a failure of retinal population codes |
title_sort | ignoring correlated activity causes a failure of retinal population codes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7490269/ https://www.ncbi.nlm.nih.gov/pubmed/32929073 http://dx.doi.org/10.1038/s41467-020-18436-2 |
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