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Lung Development Genes and Adult Lung Function
Rationale: Poor lung health in adult life may occur partly through suboptimal growth and development, as suggested by epidemiological evidence pointing to early life risk factors. Objectives: To systematically investigate the effects of lung development genes on adult lung function. Methods: Using U...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Thoracic Society
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7491406/ https://www.ncbi.nlm.nih.gov/pubmed/32392078 http://dx.doi.org/10.1164/rccm.201912-2338OC |
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author | Portas, Laura Pereira, Miguel Shaheen, Seif O. Wyss, Annah B. London, Stephanie J. Burney, Peter G. J. Hind, Matthew Dean, Charlotte H. Minelli, Cosetta |
author_facet | Portas, Laura Pereira, Miguel Shaheen, Seif O. Wyss, Annah B. London, Stephanie J. Burney, Peter G. J. Hind, Matthew Dean, Charlotte H. Minelli, Cosetta |
author_sort | Portas, Laura |
collection | PubMed |
description | Rationale: Poor lung health in adult life may occur partly through suboptimal growth and development, as suggested by epidemiological evidence pointing to early life risk factors. Objectives: To systematically investigate the effects of lung development genes on adult lung function. Methods: Using UK Biobank data, we tested the association of 391 genes known to influence lung development with FVC and FEV(1)/FVC. We split the dataset into two random subsets of 207,616 and 138,411 individuals, using the larger subset to select the most promising signals and the smaller subset for replication. Measurements and Main Results: We identified 55 genes, of which 36 (16 for FVC, 19 for FEV(1)/FVC, and one for both) had not been identified in the largest, most recent genome-wide study of lung function. Most of these 36 signals were intronic variants; expression data from blood and lung tissue showed that the majority affect the expression of the genes they lie within. Further testing of 34 of these 36 signals in the CHARGE and SpiroMeta consortia showed that 16 replicated after Bonferroni correction and another 12 replicated at nominal significance level. Of the 55 genes, 53 fell into four biological categories whose function is to regulate organ size and cell integrity (growth factors; transcriptional regulators; cell-to-cell adhesion; extracellular matrix), suggesting that these specific processes are important for adult lung health. Conclusions: Our study demonstrates the importance of lung development genes in regulating adult lung function and influencing both restrictive and obstructive patterns. Further investigation of these developmental pathways could lead to druggable targets. |
format | Online Article Text |
id | pubmed-7491406 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Thoracic Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-74914062020-09-16 Lung Development Genes and Adult Lung Function Portas, Laura Pereira, Miguel Shaheen, Seif O. Wyss, Annah B. London, Stephanie J. Burney, Peter G. J. Hind, Matthew Dean, Charlotte H. Minelli, Cosetta Am J Respir Crit Care Med Original Articles Rationale: Poor lung health in adult life may occur partly through suboptimal growth and development, as suggested by epidemiological evidence pointing to early life risk factors. Objectives: To systematically investigate the effects of lung development genes on adult lung function. Methods: Using UK Biobank data, we tested the association of 391 genes known to influence lung development with FVC and FEV(1)/FVC. We split the dataset into two random subsets of 207,616 and 138,411 individuals, using the larger subset to select the most promising signals and the smaller subset for replication. Measurements and Main Results: We identified 55 genes, of which 36 (16 for FVC, 19 for FEV(1)/FVC, and one for both) had not been identified in the largest, most recent genome-wide study of lung function. Most of these 36 signals were intronic variants; expression data from blood and lung tissue showed that the majority affect the expression of the genes they lie within. Further testing of 34 of these 36 signals in the CHARGE and SpiroMeta consortia showed that 16 replicated after Bonferroni correction and another 12 replicated at nominal significance level. Of the 55 genes, 53 fell into four biological categories whose function is to regulate organ size and cell integrity (growth factors; transcriptional regulators; cell-to-cell adhesion; extracellular matrix), suggesting that these specific processes are important for adult lung health. Conclusions: Our study demonstrates the importance of lung development genes in regulating adult lung function and influencing both restrictive and obstructive patterns. Further investigation of these developmental pathways could lead to druggable targets. American Thoracic Society 2020-09-15 2020-09-15 /pmc/articles/PMC7491406/ /pubmed/32392078 http://dx.doi.org/10.1164/rccm.201912-2338OC Text en Copyright © 2020 by the American Thoracic Society https://creativecommons.org/licenses/by-nc-nd/4.0/This article is open access and distributed under the terms of the Creative Commons Attribution Non-Commercial No Derivatives License 4.0 (http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) ). For commercial usage and reprints, please contact Diane Gern (dgern@thoracic.org). |
spellingShingle | Original Articles Portas, Laura Pereira, Miguel Shaheen, Seif O. Wyss, Annah B. London, Stephanie J. Burney, Peter G. J. Hind, Matthew Dean, Charlotte H. Minelli, Cosetta Lung Development Genes and Adult Lung Function |
title | Lung Development Genes and Adult Lung Function |
title_full | Lung Development Genes and Adult Lung Function |
title_fullStr | Lung Development Genes and Adult Lung Function |
title_full_unstemmed | Lung Development Genes and Adult Lung Function |
title_short | Lung Development Genes and Adult Lung Function |
title_sort | lung development genes and adult lung function |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7491406/ https://www.ncbi.nlm.nih.gov/pubmed/32392078 http://dx.doi.org/10.1164/rccm.201912-2338OC |
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