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Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil
INTRODUCTION: The coronavirus disease (COVD-19) outbreak has overburdened the surveillance of severe acute respiratory infections (SARIs), including the laboratory network. This study was aimed at correcting the absence of laboratory results of reported SARI deaths. METHODS: The imputation method wa...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Medicina Tropical - SBMT
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7491560/ https://www.ncbi.nlm.nih.gov/pubmed/32935787 http://dx.doi.org/10.1590/0037-8682-0528-2020 |
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author | de Oliveira, Silvano Barbosa Ganem, Fabiana de Araújo, Wildo Navegantes Casabona, Jordi Sanchez, Mauro Niskier Croda, Julio |
author_facet | de Oliveira, Silvano Barbosa Ganem, Fabiana de Araújo, Wildo Navegantes Casabona, Jordi Sanchez, Mauro Niskier Croda, Julio |
author_sort | de Oliveira, Silvano Barbosa |
collection | PubMed |
description | INTRODUCTION: The coronavirus disease (COVD-19) outbreak has overburdened the surveillance of severe acute respiratory infections (SARIs), including the laboratory network. This study was aimed at correcting the absence of laboratory results of reported SARI deaths. METHODS: The imputation method was applied for SARI deaths without laboratory information using clinico-epidemiological characteristics. RESULTS: Of 84,449 SARI deaths, 51% were confirmed with COVID-19 while 3% with other viral respiratory diseases. After the imputation method, 95% of deaths were reclassified as COVID-19 while 5% as other viral respiratory diseases. CONCLUSIONS: The imputation method was a useful and robust solution (sensitivity and positive predictive value of 98%) for missing values through clinical & epidemiological characteristics. |
format | Online Article Text |
id | pubmed-7491560 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Sociedade Brasileira de Medicina Tropical - SBMT |
record_format | MEDLINE/PubMed |
spelling | pubmed-74915602020-09-16 Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil de Oliveira, Silvano Barbosa Ganem, Fabiana de Araújo, Wildo Navegantes Casabona, Jordi Sanchez, Mauro Niskier Croda, Julio Rev Soc Bras Med Trop Short Communication INTRODUCTION: The coronavirus disease (COVD-19) outbreak has overburdened the surveillance of severe acute respiratory infections (SARIs), including the laboratory network. This study was aimed at correcting the absence of laboratory results of reported SARI deaths. METHODS: The imputation method was applied for SARI deaths without laboratory information using clinico-epidemiological characteristics. RESULTS: Of 84,449 SARI deaths, 51% were confirmed with COVID-19 while 3% with other viral respiratory diseases. After the imputation method, 95% of deaths were reclassified as COVID-19 while 5% as other viral respiratory diseases. CONCLUSIONS: The imputation method was a useful and robust solution (sensitivity and positive predictive value of 98%) for missing values through clinical & epidemiological characteristics. Sociedade Brasileira de Medicina Tropical - SBMT 2020-09-14 /pmc/articles/PMC7491560/ /pubmed/32935787 http://dx.doi.org/10.1590/0037-8682-0528-2020 Text en https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License |
spellingShingle | Short Communication de Oliveira, Silvano Barbosa Ganem, Fabiana de Araújo, Wildo Navegantes Casabona, Jordi Sanchez, Mauro Niskier Croda, Julio Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil |
title | Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil |
title_full | Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil |
title_fullStr | Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil |
title_full_unstemmed | Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil |
title_short | Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil |
title_sort | imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in brazil |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7491560/ https://www.ncbi.nlm.nih.gov/pubmed/32935787 http://dx.doi.org/10.1590/0037-8682-0528-2020 |
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