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Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil

INTRODUCTION: The coronavirus disease (COVD-19) outbreak has overburdened the surveillance of severe acute respiratory infections (SARIs), including the laboratory network. This study was aimed at correcting the absence of laboratory results of reported SARI deaths. METHODS: The imputation method wa...

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Autores principales: de Oliveira, Silvano Barbosa, Ganem, Fabiana, de Araújo, Wildo Navegantes, Casabona, Jordi, Sanchez, Mauro Niskier, Croda, Julio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Medicina Tropical - SBMT 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7491560/
https://www.ncbi.nlm.nih.gov/pubmed/32935787
http://dx.doi.org/10.1590/0037-8682-0528-2020
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author de Oliveira, Silvano Barbosa
Ganem, Fabiana
de Araújo, Wildo Navegantes
Casabona, Jordi
Sanchez, Mauro Niskier
Croda, Julio
author_facet de Oliveira, Silvano Barbosa
Ganem, Fabiana
de Araújo, Wildo Navegantes
Casabona, Jordi
Sanchez, Mauro Niskier
Croda, Julio
author_sort de Oliveira, Silvano Barbosa
collection PubMed
description INTRODUCTION: The coronavirus disease (COVD-19) outbreak has overburdened the surveillance of severe acute respiratory infections (SARIs), including the laboratory network. This study was aimed at correcting the absence of laboratory results of reported SARI deaths. METHODS: The imputation method was applied for SARI deaths without laboratory information using clinico-epidemiological characteristics. RESULTS: Of 84,449 SARI deaths, 51% were confirmed with COVID-19 while 3% with other viral respiratory diseases. After the imputation method, 95% of deaths were reclassified as COVID-19 while 5% as other viral respiratory diseases. CONCLUSIONS: The imputation method was a useful and robust solution (sensitivity and positive predictive value of 98%) for missing values through clinical & epidemiological characteristics.
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spelling pubmed-74915602020-09-16 Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil de Oliveira, Silvano Barbosa Ganem, Fabiana de Araújo, Wildo Navegantes Casabona, Jordi Sanchez, Mauro Niskier Croda, Julio Rev Soc Bras Med Trop Short Communication INTRODUCTION: The coronavirus disease (COVD-19) outbreak has overburdened the surveillance of severe acute respiratory infections (SARIs), including the laboratory network. This study was aimed at correcting the absence of laboratory results of reported SARI deaths. METHODS: The imputation method was applied for SARI deaths without laboratory information using clinico-epidemiological characteristics. RESULTS: Of 84,449 SARI deaths, 51% were confirmed with COVID-19 while 3% with other viral respiratory diseases. After the imputation method, 95% of deaths were reclassified as COVID-19 while 5% as other viral respiratory diseases. CONCLUSIONS: The imputation method was a useful and robust solution (sensitivity and positive predictive value of 98%) for missing values through clinical & epidemiological characteristics. Sociedade Brasileira de Medicina Tropical - SBMT 2020-09-14 /pmc/articles/PMC7491560/ /pubmed/32935787 http://dx.doi.org/10.1590/0037-8682-0528-2020 Text en https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License
spellingShingle Short Communication
de Oliveira, Silvano Barbosa
Ganem, Fabiana
de Araújo, Wildo Navegantes
Casabona, Jordi
Sanchez, Mauro Niskier
Croda, Julio
Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil
title Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil
title_full Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil
title_fullStr Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil
title_full_unstemmed Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil
title_short Imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in Brazil
title_sort imputation method to reduce undetected severe acute respiratory infection cases during the coronavirus disease outbreak in brazil
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7491560/
https://www.ncbi.nlm.nih.gov/pubmed/32935787
http://dx.doi.org/10.1590/0037-8682-0528-2020
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