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IGF2BP3 May Contributes to Lung Tumorigenesis by Regulating the Alternative Splicing of PKM
RNA binding proteins (RBPs) play a key role in genome regulation. Here we report the post-transcript regulation of IGF2BP3, which belongs to the insulin-like growth factor 2 mRNA binding protein family. We used iRIP-seq and RNA-seq to analyze the transcript regulation and alternative splicing on IGF...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7492387/ https://www.ncbi.nlm.nih.gov/pubmed/32984260 http://dx.doi.org/10.3389/fbioe.2020.00679 |
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author | Xueqing, Huang Jun, Zhang Yueqiang, Jiang Xin, Liao Liya, Hu Yuanyuan, Fang Yuting, Zhang Hao, Zeng Hua, Wu Jian, Liu Tiejun, Yin |
author_facet | Xueqing, Huang Jun, Zhang Yueqiang, Jiang Xin, Liao Liya, Hu Yuanyuan, Fang Yuting, Zhang Hao, Zeng Hua, Wu Jian, Liu Tiejun, Yin |
author_sort | Xueqing, Huang |
collection | PubMed |
description | RNA binding proteins (RBPs) play a key role in genome regulation. Here we report the post-transcript regulation of IGF2BP3, which belongs to the insulin-like growth factor 2 mRNA binding protein family. We used iRIP-seq and RNA-seq to analyze the transcript regulation and alternative splicing on IGF2BP3 treated with overexpression cells and control. Overexpressed IGF2BP3 has broadly increased genes expression which involved in G-protein coupled receptor signaling pathway, positive regulation of cell proliferation, and signal transduction. IGF2BP3 regulated alternative splicing of multiple genes mainly clustered at response to hypoxia, negative regulation of transcription, and embryonic development. This study first provides alternative splicing analysis on transcription level of IGF2BP3 regulation, which laid the foundation for later research on IGF2BP3 critical functions. |
format | Online Article Text |
id | pubmed-7492387 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-74923872020-09-25 IGF2BP3 May Contributes to Lung Tumorigenesis by Regulating the Alternative Splicing of PKM Xueqing, Huang Jun, Zhang Yueqiang, Jiang Xin, Liao Liya, Hu Yuanyuan, Fang Yuting, Zhang Hao, Zeng Hua, Wu Jian, Liu Tiejun, Yin Front Bioeng Biotechnol Bioengineering and Biotechnology RNA binding proteins (RBPs) play a key role in genome regulation. Here we report the post-transcript regulation of IGF2BP3, which belongs to the insulin-like growth factor 2 mRNA binding protein family. We used iRIP-seq and RNA-seq to analyze the transcript regulation and alternative splicing on IGF2BP3 treated with overexpression cells and control. Overexpressed IGF2BP3 has broadly increased genes expression which involved in G-protein coupled receptor signaling pathway, positive regulation of cell proliferation, and signal transduction. IGF2BP3 regulated alternative splicing of multiple genes mainly clustered at response to hypoxia, negative regulation of transcription, and embryonic development. This study first provides alternative splicing analysis on transcription level of IGF2BP3 regulation, which laid the foundation for later research on IGF2BP3 critical functions. Frontiers Media S.A. 2020-09-02 /pmc/articles/PMC7492387/ /pubmed/32984260 http://dx.doi.org/10.3389/fbioe.2020.00679 Text en Copyright © 2020 Xueqing, Jun, Yueqiang, Xin, Liya, Yuanyuan, Yuting, Hao, Hua, Jian and Tiejun. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Bioengineering and Biotechnology Xueqing, Huang Jun, Zhang Yueqiang, Jiang Xin, Liao Liya, Hu Yuanyuan, Fang Yuting, Zhang Hao, Zeng Hua, Wu Jian, Liu Tiejun, Yin IGF2BP3 May Contributes to Lung Tumorigenesis by Regulating the Alternative Splicing of PKM |
title | IGF2BP3 May Contributes to Lung Tumorigenesis by Regulating the Alternative Splicing of PKM |
title_full | IGF2BP3 May Contributes to Lung Tumorigenesis by Regulating the Alternative Splicing of PKM |
title_fullStr | IGF2BP3 May Contributes to Lung Tumorigenesis by Regulating the Alternative Splicing of PKM |
title_full_unstemmed | IGF2BP3 May Contributes to Lung Tumorigenesis by Regulating the Alternative Splicing of PKM |
title_short | IGF2BP3 May Contributes to Lung Tumorigenesis by Regulating the Alternative Splicing of PKM |
title_sort | igf2bp3 may contributes to lung tumorigenesis by regulating the alternative splicing of pkm |
topic | Bioengineering and Biotechnology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7492387/ https://www.ncbi.nlm.nih.gov/pubmed/32984260 http://dx.doi.org/10.3389/fbioe.2020.00679 |
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