Cargando…

Analysis of TabZIP15 transcription factor from Trichoderma asperellum ACCC30536 and its function under pathogenic toxin stress

The TabZIP15 gene encoding a 396 amino acid (aa) polypeptide in the fungus Trichoderma asperellum ACCC30536 was cloned and characterised. The protein includes a basic region motif (NR-x2-QR-x2-R) and has a pillar-like structure. The 25 basic region/leucine zipper transcription factors (TFs) identifi...

Descripción completa

Detalles Bibliográficos
Autores principales: Yu, Zeyang, Wang, Zhiying, Zhang, Yuzhou, Wang, Yucheng, Liu, Zhihua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7493895/
https://www.ncbi.nlm.nih.gov/pubmed/32934312
http://dx.doi.org/10.1038/s41598-020-72226-w
_version_ 1783582649410912256
author Yu, Zeyang
Wang, Zhiying
Zhang, Yuzhou
Wang, Yucheng
Liu, Zhihua
author_facet Yu, Zeyang
Wang, Zhiying
Zhang, Yuzhou
Wang, Yucheng
Liu, Zhihua
author_sort Yu, Zeyang
collection PubMed
description The TabZIP15 gene encoding a 396 amino acid (aa) polypeptide in the fungus Trichoderma asperellum ACCC30536 was cloned and characterised. The protein includes a basic region motif (NR-x2-QR-x2-R) and has a pillar-like structure. The 25 basic region/leucine zipper transcription factors (TFs) identified in the T. asperellum genome were divided into YAP (14 TFs), ATF2 (5), GCN4 (2), Zip1 (2), BRLZ (1) and u1 (1) subfamilies based on conserved domains. T. asperellum was cultured in minimal media (MM) control, C-Hungry and N-Hungry medium (to simulate nutrient competition and interaction with pathogens, respectively), and differential expression analysis showed that 14 TabZIP genes (including TabZIP15) were significantly altered under both conditions; TabZIP23 responded strongly to N-Hungry media and TabZIP24 responded strongly to C-Hungry media. However, only YAP genes TabZIP15, TabZIP12 and TabZIP2 were significantly upregulated under both conditions, and expression levels of TabZIP15 were highest. T. asperellum was also cultured in the presence of five fungal pathogenic toxins, and RT-qPCR results showed that TabZIP15 was significantly upregulated in four of the five toxin stress conditions (MM + Rhizoctonia solani, MM + Fusarium oxysporum, MM + Alternaria alternata and MM + Cytospora chrysosperma).
format Online
Article
Text
id pubmed-7493895
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-74938952020-09-16 Analysis of TabZIP15 transcription factor from Trichoderma asperellum ACCC30536 and its function under pathogenic toxin stress Yu, Zeyang Wang, Zhiying Zhang, Yuzhou Wang, Yucheng Liu, Zhihua Sci Rep Article The TabZIP15 gene encoding a 396 amino acid (aa) polypeptide in the fungus Trichoderma asperellum ACCC30536 was cloned and characterised. The protein includes a basic region motif (NR-x2-QR-x2-R) and has a pillar-like structure. The 25 basic region/leucine zipper transcription factors (TFs) identified in the T. asperellum genome were divided into YAP (14 TFs), ATF2 (5), GCN4 (2), Zip1 (2), BRLZ (1) and u1 (1) subfamilies based on conserved domains. T. asperellum was cultured in minimal media (MM) control, C-Hungry and N-Hungry medium (to simulate nutrient competition and interaction with pathogens, respectively), and differential expression analysis showed that 14 TabZIP genes (including TabZIP15) were significantly altered under both conditions; TabZIP23 responded strongly to N-Hungry media and TabZIP24 responded strongly to C-Hungry media. However, only YAP genes TabZIP15, TabZIP12 and TabZIP2 were significantly upregulated under both conditions, and expression levels of TabZIP15 were highest. T. asperellum was also cultured in the presence of five fungal pathogenic toxins, and RT-qPCR results showed that TabZIP15 was significantly upregulated in four of the five toxin stress conditions (MM + Rhizoctonia solani, MM + Fusarium oxysporum, MM + Alternaria alternata and MM + Cytospora chrysosperma). Nature Publishing Group UK 2020-09-15 /pmc/articles/PMC7493895/ /pubmed/32934312 http://dx.doi.org/10.1038/s41598-020-72226-w Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Yu, Zeyang
Wang, Zhiying
Zhang, Yuzhou
Wang, Yucheng
Liu, Zhihua
Analysis of TabZIP15 transcription factor from Trichoderma asperellum ACCC30536 and its function under pathogenic toxin stress
title Analysis of TabZIP15 transcription factor from Trichoderma asperellum ACCC30536 and its function under pathogenic toxin stress
title_full Analysis of TabZIP15 transcription factor from Trichoderma asperellum ACCC30536 and its function under pathogenic toxin stress
title_fullStr Analysis of TabZIP15 transcription factor from Trichoderma asperellum ACCC30536 and its function under pathogenic toxin stress
title_full_unstemmed Analysis of TabZIP15 transcription factor from Trichoderma asperellum ACCC30536 and its function under pathogenic toxin stress
title_short Analysis of TabZIP15 transcription factor from Trichoderma asperellum ACCC30536 and its function under pathogenic toxin stress
title_sort analysis of tabzip15 transcription factor from trichoderma asperellum accc30536 and its function under pathogenic toxin stress
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7493895/
https://www.ncbi.nlm.nih.gov/pubmed/32934312
http://dx.doi.org/10.1038/s41598-020-72226-w
work_keys_str_mv AT yuzeyang analysisoftabzip15transcriptionfactorfromtrichodermaasperellumaccc30536anditsfunctionunderpathogenictoxinstress
AT wangzhiying analysisoftabzip15transcriptionfactorfromtrichodermaasperellumaccc30536anditsfunctionunderpathogenictoxinstress
AT zhangyuzhou analysisoftabzip15transcriptionfactorfromtrichodermaasperellumaccc30536anditsfunctionunderpathogenictoxinstress
AT wangyucheng analysisoftabzip15transcriptionfactorfromtrichodermaasperellumaccc30536anditsfunctionunderpathogenictoxinstress
AT liuzhihua analysisoftabzip15transcriptionfactorfromtrichodermaasperellumaccc30536anditsfunctionunderpathogenictoxinstress