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Banff 2019 Meeting Report: Molecular diagnostics in solid organ transplantation–Consensus for the Banff Human Organ Transplant (B‐HOT) gene panel and open source multicenter validation

This meeting report from the XV Banff conference describes the creation of a multiorgan transplant gene panel by the Banff Molecular Diagnostics Working Group (MDWG). This Banff Human Organ Transplant (B‐HOT) panel is the culmination of previous work by the MDWG to identify a broadly useful gene pan...

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Autores principales: Mengel, Michael, Loupy, Alexandre, Haas, Mark, Roufosse, Candice, Naesens, Maarten, Akalin, Enver, Clahsen‐van Groningen, Marian C., Dagobert, Jessy, Demetris, Anthony J., Duong van Huyen, Jean‐Paul, Gueguen, Juliette, Issa, Fadi, Robin, Blaise, Rosales, Ivy, Von der Thüsen, Jan H., Sanchez‐Fueyo, Alberto, Smith, Rex N., Wood, Kathryn, Adam, Benjamin, Colvin, Robert B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7496585/
https://www.ncbi.nlm.nih.gov/pubmed/32428337
http://dx.doi.org/10.1111/ajt.16059
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author Mengel, Michael
Loupy, Alexandre
Haas, Mark
Roufosse, Candice
Naesens, Maarten
Akalin, Enver
Clahsen‐van Groningen, Marian C.
Dagobert, Jessy
Demetris, Anthony J.
Duong van Huyen, Jean‐Paul
Gueguen, Juliette
Issa, Fadi
Robin, Blaise
Rosales, Ivy
Von der Thüsen, Jan H.
Sanchez‐Fueyo, Alberto
Smith, Rex N.
Wood, Kathryn
Adam, Benjamin
Colvin, Robert B.
author_facet Mengel, Michael
Loupy, Alexandre
Haas, Mark
Roufosse, Candice
Naesens, Maarten
Akalin, Enver
Clahsen‐van Groningen, Marian C.
Dagobert, Jessy
Demetris, Anthony J.
Duong van Huyen, Jean‐Paul
Gueguen, Juliette
Issa, Fadi
Robin, Blaise
Rosales, Ivy
Von der Thüsen, Jan H.
Sanchez‐Fueyo, Alberto
Smith, Rex N.
Wood, Kathryn
Adam, Benjamin
Colvin, Robert B.
author_sort Mengel, Michael
collection PubMed
description This meeting report from the XV Banff conference describes the creation of a multiorgan transplant gene panel by the Banff Molecular Diagnostics Working Group (MDWG). This Banff Human Organ Transplant (B‐HOT) panel is the culmination of previous work by the MDWG to identify a broadly useful gene panel based on whole transcriptome technology. A data‐driven process distilled a gene list from peer‐reviewed comprehensive microarray studies that discovered and validated their use in kidney, liver, heart, and lung transplant biopsies. These were supplemented by genes that define relevant cellular pathways and cell types plus 12 reference genes used for normalization. The 770 gene B‐HOT panel includes the most pertinent genes related to rejection, tolerance, viral infections, and innate and adaptive immune responses. This commercially available panel uses the NanoString platform, which can quantitate transcripts from formalin‐fixed paraffin‐embedded samples. The B‐HOT panel will facilitate multicenter collaborative clinical research using archival samples and permit the development of an open source large database of standardized analyses, thereby expediting clinical validation studies. The MDWG believes that a pathogenesis and pathway based molecular approach will be valuable for investigators and promote therapeutic decision‐making and clinical trials.
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spelling pubmed-74965852020-09-25 Banff 2019 Meeting Report: Molecular diagnostics in solid organ transplantation–Consensus for the Banff Human Organ Transplant (B‐HOT) gene panel and open source multicenter validation Mengel, Michael Loupy, Alexandre Haas, Mark Roufosse, Candice Naesens, Maarten Akalin, Enver Clahsen‐van Groningen, Marian C. Dagobert, Jessy Demetris, Anthony J. Duong van Huyen, Jean‐Paul Gueguen, Juliette Issa, Fadi Robin, Blaise Rosales, Ivy Von der Thüsen, Jan H. Sanchez‐Fueyo, Alberto Smith, Rex N. Wood, Kathryn Adam, Benjamin Colvin, Robert B. Am J Transplant Meeting Reports This meeting report from the XV Banff conference describes the creation of a multiorgan transplant gene panel by the Banff Molecular Diagnostics Working Group (MDWG). This Banff Human Organ Transplant (B‐HOT) panel is the culmination of previous work by the MDWG to identify a broadly useful gene panel based on whole transcriptome technology. A data‐driven process distilled a gene list from peer‐reviewed comprehensive microarray studies that discovered and validated their use in kidney, liver, heart, and lung transplant biopsies. These were supplemented by genes that define relevant cellular pathways and cell types plus 12 reference genes used for normalization. The 770 gene B‐HOT panel includes the most pertinent genes related to rejection, tolerance, viral infections, and innate and adaptive immune responses. This commercially available panel uses the NanoString platform, which can quantitate transcripts from formalin‐fixed paraffin‐embedded samples. The B‐HOT panel will facilitate multicenter collaborative clinical research using archival samples and permit the development of an open source large database of standardized analyses, thereby expediting clinical validation studies. The MDWG believes that a pathogenesis and pathway based molecular approach will be valuable for investigators and promote therapeutic decision‐making and clinical trials. John Wiley and Sons Inc. 2020-06-27 2020-09 /pmc/articles/PMC7496585/ /pubmed/32428337 http://dx.doi.org/10.1111/ajt.16059 Text en © 2020 The Authors. American Journal of Transplantation published by Wiley Periodicals LLC on behalf of The American Society of Transplantation and the American Society of Transplant Surgeons This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Meeting Reports
Mengel, Michael
Loupy, Alexandre
Haas, Mark
Roufosse, Candice
Naesens, Maarten
Akalin, Enver
Clahsen‐van Groningen, Marian C.
Dagobert, Jessy
Demetris, Anthony J.
Duong van Huyen, Jean‐Paul
Gueguen, Juliette
Issa, Fadi
Robin, Blaise
Rosales, Ivy
Von der Thüsen, Jan H.
Sanchez‐Fueyo, Alberto
Smith, Rex N.
Wood, Kathryn
Adam, Benjamin
Colvin, Robert B.
Banff 2019 Meeting Report: Molecular diagnostics in solid organ transplantation–Consensus for the Banff Human Organ Transplant (B‐HOT) gene panel and open source multicenter validation
title Banff 2019 Meeting Report: Molecular diagnostics in solid organ transplantation–Consensus for the Banff Human Organ Transplant (B‐HOT) gene panel and open source multicenter validation
title_full Banff 2019 Meeting Report: Molecular diagnostics in solid organ transplantation–Consensus for the Banff Human Organ Transplant (B‐HOT) gene panel and open source multicenter validation
title_fullStr Banff 2019 Meeting Report: Molecular diagnostics in solid organ transplantation–Consensus for the Banff Human Organ Transplant (B‐HOT) gene panel and open source multicenter validation
title_full_unstemmed Banff 2019 Meeting Report: Molecular diagnostics in solid organ transplantation–Consensus for the Banff Human Organ Transplant (B‐HOT) gene panel and open source multicenter validation
title_short Banff 2019 Meeting Report: Molecular diagnostics in solid organ transplantation–Consensus for the Banff Human Organ Transplant (B‐HOT) gene panel and open source multicenter validation
title_sort banff 2019 meeting report: molecular diagnostics in solid organ transplantation–consensus for the banff human organ transplant (b‐hot) gene panel and open source multicenter validation
topic Meeting Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7496585/
https://www.ncbi.nlm.nih.gov/pubmed/32428337
http://dx.doi.org/10.1111/ajt.16059
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