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Dual‐PKS Cluster for Biosynthesis of a Light‐Induced Secondary Metabolite Found from Genome Sequencing of Hyphodiscus hymeniophilus Fungus

Filamentous fungi are known producers of important secondary metabolites. In spite of this, the majority of these organisms have not been studied at the genome level, leaving many of the bioactive molecules they produce undiscovered. In this study, we explore the secondary metabolite potential of an...

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Autores principales: Kramer, Glenna J., Pimentel‐Elardo, Sheila, Nodwell, Justin R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7496686/
https://www.ncbi.nlm.nih.gov/pubmed/32314858
http://dx.doi.org/10.1002/cbic.201900689
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author Kramer, Glenna J.
Pimentel‐Elardo, Sheila
Nodwell, Justin R.
author_facet Kramer, Glenna J.
Pimentel‐Elardo, Sheila
Nodwell, Justin R.
author_sort Kramer, Glenna J.
collection PubMed
description Filamentous fungi are known producers of important secondary metabolites. In spite of this, the majority of these organisms have not been studied at the genome level, leaving many of the bioactive molecules they produce undiscovered. In this study, we explore the secondary metabolite potential of an understudied fungus, Hyphodiscus hymeniophilus. By sequencing and assembling the first genome from this genus, we show that this fungus has genes for at least 20 natural products and that many of these products are likely novel. One of these metabolites is identified: a new, red‐pigmented member of the azaphilone class, hyphodiscorubrin. We show that this metabolite is only produced when the fungus is grown in the light. Furthermore, the biosynthetic gene cluster of hyphodiscorubrin is identified though homology to other known azaphilone producing clusters.
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spelling pubmed-74966862020-09-25 Dual‐PKS Cluster for Biosynthesis of a Light‐Induced Secondary Metabolite Found from Genome Sequencing of Hyphodiscus hymeniophilus Fungus Kramer, Glenna J. Pimentel‐Elardo, Sheila Nodwell, Justin R. Chembiochem Communications Filamentous fungi are known producers of important secondary metabolites. In spite of this, the majority of these organisms have not been studied at the genome level, leaving many of the bioactive molecules they produce undiscovered. In this study, we explore the secondary metabolite potential of an understudied fungus, Hyphodiscus hymeniophilus. By sequencing and assembling the first genome from this genus, we show that this fungus has genes for at least 20 natural products and that many of these products are likely novel. One of these metabolites is identified: a new, red‐pigmented member of the azaphilone class, hyphodiscorubrin. We show that this metabolite is only produced when the fungus is grown in the light. Furthermore, the biosynthetic gene cluster of hyphodiscorubrin is identified though homology to other known azaphilone producing clusters. John Wiley and Sons Inc. 2020-04-21 2020-08-03 /pmc/articles/PMC7496686/ /pubmed/32314858 http://dx.doi.org/10.1002/cbic.201900689 Text en © 2020 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Communications
Kramer, Glenna J.
Pimentel‐Elardo, Sheila
Nodwell, Justin R.
Dual‐PKS Cluster for Biosynthesis of a Light‐Induced Secondary Metabolite Found from Genome Sequencing of Hyphodiscus hymeniophilus Fungus
title Dual‐PKS Cluster for Biosynthesis of a Light‐Induced Secondary Metabolite Found from Genome Sequencing of Hyphodiscus hymeniophilus Fungus
title_full Dual‐PKS Cluster for Biosynthesis of a Light‐Induced Secondary Metabolite Found from Genome Sequencing of Hyphodiscus hymeniophilus Fungus
title_fullStr Dual‐PKS Cluster for Biosynthesis of a Light‐Induced Secondary Metabolite Found from Genome Sequencing of Hyphodiscus hymeniophilus Fungus
title_full_unstemmed Dual‐PKS Cluster for Biosynthesis of a Light‐Induced Secondary Metabolite Found from Genome Sequencing of Hyphodiscus hymeniophilus Fungus
title_short Dual‐PKS Cluster for Biosynthesis of a Light‐Induced Secondary Metabolite Found from Genome Sequencing of Hyphodiscus hymeniophilus Fungus
title_sort dual‐pks cluster for biosynthesis of a light‐induced secondary metabolite found from genome sequencing of hyphodiscus hymeniophilus fungus
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7496686/
https://www.ncbi.nlm.nih.gov/pubmed/32314858
http://dx.doi.org/10.1002/cbic.201900689
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