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Deep learning for automated detection of Drosophila suzukii: potential for UAV‐based monitoring

BACKGROUND: The fruit fly Drosophila suzukii, or spotted wing drosophila (SWD), is a serious pest worldwide, attacking many soft‐skinned fruits. An efficient monitoring system that identifies and counts SWD in crops and their surroundings is therefore essential for integrated pest management (IPM) s...

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Autores principales: Roosjen, Peter PJ, Kellenberger, Benjamin, Kooistra, Lammert, Green, David R, Fahrentrapp, Johannes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7496713/
https://www.ncbi.nlm.nih.gov/pubmed/32246738
http://dx.doi.org/10.1002/ps.5845
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author Roosjen, Peter PJ
Kellenberger, Benjamin
Kooistra, Lammert
Green, David R
Fahrentrapp, Johannes
author_facet Roosjen, Peter PJ
Kellenberger, Benjamin
Kooistra, Lammert
Green, David R
Fahrentrapp, Johannes
author_sort Roosjen, Peter PJ
collection PubMed
description BACKGROUND: The fruit fly Drosophila suzukii, or spotted wing drosophila (SWD), is a serious pest worldwide, attacking many soft‐skinned fruits. An efficient monitoring system that identifies and counts SWD in crops and their surroundings is therefore essential for integrated pest management (IPM) strategies. Existing methods, such as catching flies in liquid bait traps and counting them manually, are costly, time‐consuming and labour‐intensive. To overcome these limitations, we studied insect trap monitoring using image‐based object detection with deep learning. RESULTS: Based on an image database with 4753 annotated SWD flies, we trained a ResNet‐18‐based deep convolutional neural network to detect and count SWD, including sex prediction and discrimination. The results show that SWD can be detected with an area under the precision recall curve (AUC) of 0.506 (female) and 0.603 (male) in digital images taken from a static position. For images collected using an unmanned aerial vehicle (UAV), the algorithm detected SWD individuals with an AUC of 0.086 (female) and 0.284 (male). The lower AUC for the aerial imagery was due to lower image quality caused by stabilisation manoeuvres of the UAV during image collection. CONCLUSION: Our results indicate that it is possible to monitor SWD using deep learning and object detection. Moreover, the results demonstrate the potential of UAVs to monitor insect traps, which could be valuable in the development of autonomous insect monitoring systems and IPM. © 2020 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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spelling pubmed-74967132020-09-25 Deep learning for automated detection of Drosophila suzukii: potential for UAV‐based monitoring Roosjen, Peter PJ Kellenberger, Benjamin Kooistra, Lammert Green, David R Fahrentrapp, Johannes Pest Manag Sci Research Articles BACKGROUND: The fruit fly Drosophila suzukii, or spotted wing drosophila (SWD), is a serious pest worldwide, attacking many soft‐skinned fruits. An efficient monitoring system that identifies and counts SWD in crops and their surroundings is therefore essential for integrated pest management (IPM) strategies. Existing methods, such as catching flies in liquid bait traps and counting them manually, are costly, time‐consuming and labour‐intensive. To overcome these limitations, we studied insect trap monitoring using image‐based object detection with deep learning. RESULTS: Based on an image database with 4753 annotated SWD flies, we trained a ResNet‐18‐based deep convolutional neural network to detect and count SWD, including sex prediction and discrimination. The results show that SWD can be detected with an area under the precision recall curve (AUC) of 0.506 (female) and 0.603 (male) in digital images taken from a static position. For images collected using an unmanned aerial vehicle (UAV), the algorithm detected SWD individuals with an AUC of 0.086 (female) and 0.284 (male). The lower AUC for the aerial imagery was due to lower image quality caused by stabilisation manoeuvres of the UAV during image collection. CONCLUSION: Our results indicate that it is possible to monitor SWD using deep learning and object detection. Moreover, the results demonstrate the potential of UAVs to monitor insect traps, which could be valuable in the development of autonomous insect monitoring systems and IPM. © 2020 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry. John Wiley & Sons, Ltd. 2020-04-20 2020-09 /pmc/articles/PMC7496713/ /pubmed/32246738 http://dx.doi.org/10.1002/ps.5845 Text en © 2020 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Roosjen, Peter PJ
Kellenberger, Benjamin
Kooistra, Lammert
Green, David R
Fahrentrapp, Johannes
Deep learning for automated detection of Drosophila suzukii: potential for UAV‐based monitoring
title Deep learning for automated detection of Drosophila suzukii: potential for UAV‐based monitoring
title_full Deep learning for automated detection of Drosophila suzukii: potential for UAV‐based monitoring
title_fullStr Deep learning for automated detection of Drosophila suzukii: potential for UAV‐based monitoring
title_full_unstemmed Deep learning for automated detection of Drosophila suzukii: potential for UAV‐based monitoring
title_short Deep learning for automated detection of Drosophila suzukii: potential for UAV‐based monitoring
title_sort deep learning for automated detection of drosophila suzukii: potential for uav‐based monitoring
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7496713/
https://www.ncbi.nlm.nih.gov/pubmed/32246738
http://dx.doi.org/10.1002/ps.5845
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