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The foxtail millet (Setaria italica) terpene synthase gene family

Terpenoid metabolism plays vital roles in stress defense and the environmental adaptation of monocot crops. Here, we describe the identification of the terpene synthase (TPS) gene family of the panicoid food and bioenergy model crop foxtail millet (Setaria italica). The diploid S. italica genome con...

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Autores principales: Karunanithi, Prema S., Berrios, David I., Wang, Sadira, Davis, John, Shen, Tong, Fiehn, Oliver, Maloof, Julin N., Zerbe, Philipp
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7497057/
https://www.ncbi.nlm.nih.gov/pubmed/32282967
http://dx.doi.org/10.1111/tpj.14771
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author Karunanithi, Prema S.
Berrios, David I.
Wang, Sadira
Davis, John
Shen, Tong
Fiehn, Oliver
Maloof, Julin N.
Zerbe, Philipp
author_facet Karunanithi, Prema S.
Berrios, David I.
Wang, Sadira
Davis, John
Shen, Tong
Fiehn, Oliver
Maloof, Julin N.
Zerbe, Philipp
author_sort Karunanithi, Prema S.
collection PubMed
description Terpenoid metabolism plays vital roles in stress defense and the environmental adaptation of monocot crops. Here, we describe the identification of the terpene synthase (TPS) gene family of the panicoid food and bioenergy model crop foxtail millet (Setaria italica). The diploid S. italica genome contains 32 TPS genes, 17 of which were biochemically characterized in this study. Unlike other thus far investigated grasses, S. italica contains TPSs producing all three ent‐, (+)‐ and syn‐copalyl pyrophosphate stereoisomers that naturally occur as central building blocks in the biosynthesis of distinct monocot diterpenoids. Conversion of these intermediates by the promiscuous TPS SiTPS8 yielded different diterpenoid scaffolds. Additionally, a cytochrome P450 monooxygenase (CYP99A17), which genomically clustered with SiTPS8, catalyzes the C19 hydroxylation of SiTPS8 products to generate the corresponding diterpene alcohols. The presence of syntenic orthologs to about 19% of the S. italica TPSs in related grasses supports a common ancestry of selected pathway branches. Among the identified enzyme products, abietadien‐19‐ol, syn‐pimara‐7,15‐dien‐19‐ol and germacrene‐d‐4‐ol were detectable in planta, and gene expression analysis of the biosynthetic TPSs showed distinct and, albeit moderately, inducible expression patterns in response to biotic and abiotic stress. In vitro growth‐inhibiting activity of abietadien‐19‐ol and syn‐pimara‐7,15‐dien‐19‐ol against Fusarium verticillioides and Fusarium subglutinans may indicate pathogen defensive functions, whereas the low antifungal efficacy of tested sesquiterpenoids supports other bioactivities. Together, these findings expand the known chemical space of monocot terpenoid metabolism to enable further investigations of terpenoid‐mediated stress resilience in these agriculturally important species.
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spelling pubmed-74970572020-09-25 The foxtail millet (Setaria italica) terpene synthase gene family Karunanithi, Prema S. Berrios, David I. Wang, Sadira Davis, John Shen, Tong Fiehn, Oliver Maloof, Julin N. Zerbe, Philipp Plant J Original Articles Terpenoid metabolism plays vital roles in stress defense and the environmental adaptation of monocot crops. Here, we describe the identification of the terpene synthase (TPS) gene family of the panicoid food and bioenergy model crop foxtail millet (Setaria italica). The diploid S. italica genome contains 32 TPS genes, 17 of which were biochemically characterized in this study. Unlike other thus far investigated grasses, S. italica contains TPSs producing all three ent‐, (+)‐ and syn‐copalyl pyrophosphate stereoisomers that naturally occur as central building blocks in the biosynthesis of distinct monocot diterpenoids. Conversion of these intermediates by the promiscuous TPS SiTPS8 yielded different diterpenoid scaffolds. Additionally, a cytochrome P450 monooxygenase (CYP99A17), which genomically clustered with SiTPS8, catalyzes the C19 hydroxylation of SiTPS8 products to generate the corresponding diterpene alcohols. The presence of syntenic orthologs to about 19% of the S. italica TPSs in related grasses supports a common ancestry of selected pathway branches. Among the identified enzyme products, abietadien‐19‐ol, syn‐pimara‐7,15‐dien‐19‐ol and germacrene‐d‐4‐ol were detectable in planta, and gene expression analysis of the biosynthetic TPSs showed distinct and, albeit moderately, inducible expression patterns in response to biotic and abiotic stress. In vitro growth‐inhibiting activity of abietadien‐19‐ol and syn‐pimara‐7,15‐dien‐19‐ol against Fusarium verticillioides and Fusarium subglutinans may indicate pathogen defensive functions, whereas the low antifungal efficacy of tested sesquiterpenoids supports other bioactivities. Together, these findings expand the known chemical space of monocot terpenoid metabolism to enable further investigations of terpenoid‐mediated stress resilience in these agriculturally important species. John Wiley and Sons Inc. 2020-05-03 2020-07 /pmc/articles/PMC7497057/ /pubmed/32282967 http://dx.doi.org/10.1111/tpj.14771 Text en © 2020 The Authors. The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Karunanithi, Prema S.
Berrios, David I.
Wang, Sadira
Davis, John
Shen, Tong
Fiehn, Oliver
Maloof, Julin N.
Zerbe, Philipp
The foxtail millet (Setaria italica) terpene synthase gene family
title The foxtail millet (Setaria italica) terpene synthase gene family
title_full The foxtail millet (Setaria italica) terpene synthase gene family
title_fullStr The foxtail millet (Setaria italica) terpene synthase gene family
title_full_unstemmed The foxtail millet (Setaria italica) terpene synthase gene family
title_short The foxtail millet (Setaria italica) terpene synthase gene family
title_sort foxtail millet (setaria italica) terpene synthase gene family
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7497057/
https://www.ncbi.nlm.nih.gov/pubmed/32282967
http://dx.doi.org/10.1111/tpj.14771
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