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Expression Profiles of CircRNA and mRNA in Lacrimal Glands of AQP5(–/–) Mice With Primary Dry Eye
Purpose: This work aimed to identify differentially expressed circular RNAs (circRNAs) and elucidate their potential function in aquaporin 5 (AQP5) knockout (AQP5(–/–)) mice with the primary dry eye phenotype. Methods: A slit lamp examination was performed on AQP5(–/–) mice to assess corneal epithel...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7497440/ https://www.ncbi.nlm.nih.gov/pubmed/33013441 http://dx.doi.org/10.3389/fphys.2020.01010 |
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author | Liu, Yaning Di, Guohu Hu, Shaohua Zhao, Tianyu Xu, Xinkai Wang, Xiaoyi Chen, Peng |
author_facet | Liu, Yaning Di, Guohu Hu, Shaohua Zhao, Tianyu Xu, Xinkai Wang, Xiaoyi Chen, Peng |
author_sort | Liu, Yaning |
collection | PubMed |
description | Purpose: This work aimed to identify differentially expressed circular RNAs (circRNAs) and elucidate their potential function in aquaporin 5 (AQP5) knockout (AQP5(–/–)) mice with the primary dry eye phenotype. Methods: A slit lamp examination was performed on AQP5(–/–) mice to assess corneal epithelial defects using fluorescein sodium staining. Hematoxylin–eosin staining and transmission electron microscopy analysis were performed to identify structural changes in lacrimal gland epithelial cells due to AQP5 deficiency. The expression profiles of circRNA and messenger RNA (mRNA) were determined by a microarray analysis. The selected circRNA was verified by quantitative real-time reverse transcription-polymerase chain reaction (qRT-PCR). Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed to predict the biological functions and the potential pathways of parental genes involved in lacrimal gland epithelial cell changes. According to the bioinformatics analysis of identified circRNAs, we predicted a circRNA–miRNA–mRNA network of phagosomes. Results: The AQP5(–/–) mice spontaneously exhibit dry eye symptoms, wherein the AQP5 deficiency changes the structure of lacrimal gland epithelial cells. The analysis revealed that, compared to AQP5(+/+) mice, 30 circRNAs in the lacrimal glands of AQP5(–/–) mice were differentially expressed (fold change ≥ 2.0, p < 0.05). Nine upregulated circRNAs were identified using qRT-PCR, and nine upregulated validated circRNAs, 40 altered microRNAs (miRNAs), and nine upregulated mRNAs were identified through a network analysis. The KEGG analysis showed that these nine target genes were expressed in phagosomes. Conclusion: The AQP5(–/–) mice have primary and stable dry eye phenotypes from birth. We identified differently expressed circRNAs in the lacrimal glands of AQP5(–/–) and AQP5(+/+) mice, predicting a circRNA–miRNA–mRNA network of phagosomes. CircRNA likely plays an important role in lacrimal gland epithelial cell pathogenesis. Therefore, it is reasonable to use circRNA as a potential therapeutic agent for the treatment of dry eyes. |
format | Online Article Text |
id | pubmed-7497440 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-74974402020-10-02 Expression Profiles of CircRNA and mRNA in Lacrimal Glands of AQP5(–/–) Mice With Primary Dry Eye Liu, Yaning Di, Guohu Hu, Shaohua Zhao, Tianyu Xu, Xinkai Wang, Xiaoyi Chen, Peng Front Physiol Physiology Purpose: This work aimed to identify differentially expressed circular RNAs (circRNAs) and elucidate their potential function in aquaporin 5 (AQP5) knockout (AQP5(–/–)) mice with the primary dry eye phenotype. Methods: A slit lamp examination was performed on AQP5(–/–) mice to assess corneal epithelial defects using fluorescein sodium staining. Hematoxylin–eosin staining and transmission electron microscopy analysis were performed to identify structural changes in lacrimal gland epithelial cells due to AQP5 deficiency. The expression profiles of circRNA and messenger RNA (mRNA) were determined by a microarray analysis. The selected circRNA was verified by quantitative real-time reverse transcription-polymerase chain reaction (qRT-PCR). Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed to predict the biological functions and the potential pathways of parental genes involved in lacrimal gland epithelial cell changes. According to the bioinformatics analysis of identified circRNAs, we predicted a circRNA–miRNA–mRNA network of phagosomes. Results: The AQP5(–/–) mice spontaneously exhibit dry eye symptoms, wherein the AQP5 deficiency changes the structure of lacrimal gland epithelial cells. The analysis revealed that, compared to AQP5(+/+) mice, 30 circRNAs in the lacrimal glands of AQP5(–/–) mice were differentially expressed (fold change ≥ 2.0, p < 0.05). Nine upregulated circRNAs were identified using qRT-PCR, and nine upregulated validated circRNAs, 40 altered microRNAs (miRNAs), and nine upregulated mRNAs were identified through a network analysis. The KEGG analysis showed that these nine target genes were expressed in phagosomes. Conclusion: The AQP5(–/–) mice have primary and stable dry eye phenotypes from birth. We identified differently expressed circRNAs in the lacrimal glands of AQP5(–/–) and AQP5(+/+) mice, predicting a circRNA–miRNA–mRNA network of phagosomes. CircRNA likely plays an important role in lacrimal gland epithelial cell pathogenesis. Therefore, it is reasonable to use circRNA as a potential therapeutic agent for the treatment of dry eyes. Frontiers Media S.A. 2020-09-03 /pmc/articles/PMC7497440/ /pubmed/33013441 http://dx.doi.org/10.3389/fphys.2020.01010 Text en Copyright © 2020 Liu, Di, Hu, Zhao, Xu, Wang and Chen. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Physiology Liu, Yaning Di, Guohu Hu, Shaohua Zhao, Tianyu Xu, Xinkai Wang, Xiaoyi Chen, Peng Expression Profiles of CircRNA and mRNA in Lacrimal Glands of AQP5(–/–) Mice With Primary Dry Eye |
title | Expression Profiles of CircRNA and mRNA in Lacrimal Glands of AQP5(–/–) Mice With Primary Dry Eye |
title_full | Expression Profiles of CircRNA and mRNA in Lacrimal Glands of AQP5(–/–) Mice With Primary Dry Eye |
title_fullStr | Expression Profiles of CircRNA and mRNA in Lacrimal Glands of AQP5(–/–) Mice With Primary Dry Eye |
title_full_unstemmed | Expression Profiles of CircRNA and mRNA in Lacrimal Glands of AQP5(–/–) Mice With Primary Dry Eye |
title_short | Expression Profiles of CircRNA and mRNA in Lacrimal Glands of AQP5(–/–) Mice With Primary Dry Eye |
title_sort | expression profiles of circrna and mrna in lacrimal glands of aqp5(–/–) mice with primary dry eye |
topic | Physiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7497440/ https://www.ncbi.nlm.nih.gov/pubmed/33013441 http://dx.doi.org/10.3389/fphys.2020.01010 |
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