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Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study
The genetic diagnostics of inherited neuromuscular diseases (NMDs) is challenging due to their clinical and genetic heterogeneity. We launched an online survey within the EURO-NMD European Reference Network (ERN) to collect information about the availability/distribution of genetic testing across 61...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7500674/ https://www.ncbi.nlm.nih.gov/pubmed/32946487 http://dx.doi.org/10.1371/journal.pone.0239329 |
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author | Peterlin, Borut Gualandi, Francesca Maver, Ales Servidei, Serenella van der Maarel, Silvère M. Lamy, Francoise Mejat, Alexander Evangelista, Teresinha Ferlini, Alessandra |
author_facet | Peterlin, Borut Gualandi, Francesca Maver, Ales Servidei, Serenella van der Maarel, Silvère M. Lamy, Francoise Mejat, Alexander Evangelista, Teresinha Ferlini, Alessandra |
author_sort | Peterlin, Borut |
collection | PubMed |
description | The genetic diagnostics of inherited neuromuscular diseases (NMDs) is challenging due to their clinical and genetic heterogeneity. We launched an online survey within the EURO-NMD European Reference Network (ERN) to collect information about the availability/distribution of genetic testing across 61 ERN health care providers (HCPs). A 17 items questionnaire was designed to address methods used, the number of genetic tests available, the clinical pathway to access genetic testing, the use of next-generation sequencing (NGS) and participation to quality assessment schemes (QAs). A remarkable number of HCPs (49%) offers ≥ 500 genetic tests per year, 43,6% offers 100–500 genetic tests per year, and 7,2% ≤ 100 per year. NGS is used by 94% of centres, Sanger sequencing by 84%, MLPA by 66% and Southern blotting by 36%. The majority of centres (60%) offer NGS for all patients that fulfil criteria for NMD of genetic origin. Pipelines for NGS vary amongst centres, even within the same national system. Referral of patients to genetic laboratories by specialists was frequently reported (58%), and 65% of centres participates in genetic testing QAs. We specifically evaluated how many centres cover SMA, DMD, Pompe, LGMDs, and TTR genes/diseases genetic diagnosis, since these rare diseases benefit from personalised therapies. We used the Orphanet EUGT numbers, provided by 82% of HCPs. SMA, DMD, LGMD, TTR and GAA genes are covered by EUGTs although with different numbers and modalities. The number of genetic tests for NMDs offered across HCPs National Health systems is quite high, including routine techniques and NGS. The number and type of tests offered and the clinical practices differ among centres. We provided evidence that survey tools might be useful to learn about the state-of-the-art of ERN health-related activities and to foster harmonisation and standardisation of the complex care for the rare disease patients in the EU. |
format | Online Article Text |
id | pubmed-7500674 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-75006742020-09-24 Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study Peterlin, Borut Gualandi, Francesca Maver, Ales Servidei, Serenella van der Maarel, Silvère M. Lamy, Francoise Mejat, Alexander Evangelista, Teresinha Ferlini, Alessandra PLoS One Research Article The genetic diagnostics of inherited neuromuscular diseases (NMDs) is challenging due to their clinical and genetic heterogeneity. We launched an online survey within the EURO-NMD European Reference Network (ERN) to collect information about the availability/distribution of genetic testing across 61 ERN health care providers (HCPs). A 17 items questionnaire was designed to address methods used, the number of genetic tests available, the clinical pathway to access genetic testing, the use of next-generation sequencing (NGS) and participation to quality assessment schemes (QAs). A remarkable number of HCPs (49%) offers ≥ 500 genetic tests per year, 43,6% offers 100–500 genetic tests per year, and 7,2% ≤ 100 per year. NGS is used by 94% of centres, Sanger sequencing by 84%, MLPA by 66% and Southern blotting by 36%. The majority of centres (60%) offer NGS for all patients that fulfil criteria for NMD of genetic origin. Pipelines for NGS vary amongst centres, even within the same national system. Referral of patients to genetic laboratories by specialists was frequently reported (58%), and 65% of centres participates in genetic testing QAs. We specifically evaluated how many centres cover SMA, DMD, Pompe, LGMDs, and TTR genes/diseases genetic diagnosis, since these rare diseases benefit from personalised therapies. We used the Orphanet EUGT numbers, provided by 82% of HCPs. SMA, DMD, LGMD, TTR and GAA genes are covered by EUGTs although with different numbers and modalities. The number of genetic tests for NMDs offered across HCPs National Health systems is quite high, including routine techniques and NGS. The number and type of tests offered and the clinical practices differ among centres. We provided evidence that survey tools might be useful to learn about the state-of-the-art of ERN health-related activities and to foster harmonisation and standardisation of the complex care for the rare disease patients in the EU. Public Library of Science 2020-09-18 /pmc/articles/PMC7500674/ /pubmed/32946487 http://dx.doi.org/10.1371/journal.pone.0239329 Text en © 2020 Peterlin et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Peterlin, Borut Gualandi, Francesca Maver, Ales Servidei, Serenella van der Maarel, Silvère M. Lamy, Francoise Mejat, Alexander Evangelista, Teresinha Ferlini, Alessandra Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study |
title | Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study |
title_full | Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study |
title_fullStr | Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study |
title_full_unstemmed | Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study |
title_short | Genetic testing offer for inherited neuromuscular diseases within the EURO-NMD reference network: A European survey study |
title_sort | genetic testing offer for inherited neuromuscular diseases within the euro-nmd reference network: a european survey study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7500674/ https://www.ncbi.nlm.nih.gov/pubmed/32946487 http://dx.doi.org/10.1371/journal.pone.0239329 |
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