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Differential Gut Microbiota and Fecal Metabolites Related With the Clinical Subtypes of Myasthenia Gravis
Myasthenia gravis (MG) is a devastating acquired autoimmune disease. Previous studies have observed that disturbances of gut microbiome may attribute to the development of MG through fecal metabolomic signatures in humans. However, whether there were differential gut microbial and fecal metabolomic...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7506099/ https://www.ncbi.nlm.nih.gov/pubmed/33013794 http://dx.doi.org/10.3389/fmicb.2020.564579 |
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author | Tan, Xunmin Huang, Yu Chai, Tingjia Zhao, Xiaoli Li, Yifan Wu, Jing Zhang, Hanping Duan, Jiajia Liang, Weiwei Yin, Bangmin Cheng, Ke Yu, Gang Zheng, Peng Xie, Peng |
author_facet | Tan, Xunmin Huang, Yu Chai, Tingjia Zhao, Xiaoli Li, Yifan Wu, Jing Zhang, Hanping Duan, Jiajia Liang, Weiwei Yin, Bangmin Cheng, Ke Yu, Gang Zheng, Peng Xie, Peng |
author_sort | Tan, Xunmin |
collection | PubMed |
description | Myasthenia gravis (MG) is a devastating acquired autoimmune disease. Previous studies have observed that disturbances of gut microbiome may attribute to the development of MG through fecal metabolomic signatures in humans. However, whether there were differential gut microbial and fecal metabolomic phenotypes in different subtypes of MG remains unclear. Here, our objective was to explore whether the microbial and metabolic signatures of ocular (OMG) and generalized myasthenia gravis (GMG) were different, and further identify the shared and distinct markers for patients with OMG and GMG. In this study, 16S ribosomal RNA (rRNA) gene sequencing and gas chromatography-mass spectrometry (GC/MS) were performed to capture the microbial and metabolic signatures of OMG and GMG, respectively. Random forest (RF) classifiers was used to identify the discriminative markers for OMG and GMG. Compared with healthy control (HC) group, GMG group, but not OMG group, showed a significant decrease in α-phylogenetic diversity. Both OMG and GMG groups, however, displayed significant gut microbial and metabolic disorders. Totally, we identified 20 OTUs and 9 metabolites specific to OMG group, and 23 OTUs and 7 metabolites specific to GMG group. Moreover, combinatorial biomarkers containing 15 discriminative OTUs and 2 differential metabolites were capable of discriminating OMG and GMG from each other, as well as from HCs, with AUC values ranging from 0.934 to 0.990. In conclusion, different subtypes of MG harbored differential gut microbiota, which generated discriminative fecal metabolism. |
format | Online Article Text |
id | pubmed-7506099 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-75060992020-10-02 Differential Gut Microbiota and Fecal Metabolites Related With the Clinical Subtypes of Myasthenia Gravis Tan, Xunmin Huang, Yu Chai, Tingjia Zhao, Xiaoli Li, Yifan Wu, Jing Zhang, Hanping Duan, Jiajia Liang, Weiwei Yin, Bangmin Cheng, Ke Yu, Gang Zheng, Peng Xie, Peng Front Microbiol Microbiology Myasthenia gravis (MG) is a devastating acquired autoimmune disease. Previous studies have observed that disturbances of gut microbiome may attribute to the development of MG through fecal metabolomic signatures in humans. However, whether there were differential gut microbial and fecal metabolomic phenotypes in different subtypes of MG remains unclear. Here, our objective was to explore whether the microbial and metabolic signatures of ocular (OMG) and generalized myasthenia gravis (GMG) were different, and further identify the shared and distinct markers for patients with OMG and GMG. In this study, 16S ribosomal RNA (rRNA) gene sequencing and gas chromatography-mass spectrometry (GC/MS) were performed to capture the microbial and metabolic signatures of OMG and GMG, respectively. Random forest (RF) classifiers was used to identify the discriminative markers for OMG and GMG. Compared with healthy control (HC) group, GMG group, but not OMG group, showed a significant decrease in α-phylogenetic diversity. Both OMG and GMG groups, however, displayed significant gut microbial and metabolic disorders. Totally, we identified 20 OTUs and 9 metabolites specific to OMG group, and 23 OTUs and 7 metabolites specific to GMG group. Moreover, combinatorial biomarkers containing 15 discriminative OTUs and 2 differential metabolites were capable of discriminating OMG and GMG from each other, as well as from HCs, with AUC values ranging from 0.934 to 0.990. In conclusion, different subtypes of MG harbored differential gut microbiota, which generated discriminative fecal metabolism. Frontiers Media S.A. 2020-09-08 /pmc/articles/PMC7506099/ /pubmed/33013794 http://dx.doi.org/10.3389/fmicb.2020.564579 Text en Copyright © 2020 Tan, Huang, Chai, Zhao, Li, Wu, Zhang, Duan, Liang, Yin, Cheng, Yu, Zheng and Xie. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Tan, Xunmin Huang, Yu Chai, Tingjia Zhao, Xiaoli Li, Yifan Wu, Jing Zhang, Hanping Duan, Jiajia Liang, Weiwei Yin, Bangmin Cheng, Ke Yu, Gang Zheng, Peng Xie, Peng Differential Gut Microbiota and Fecal Metabolites Related With the Clinical Subtypes of Myasthenia Gravis |
title | Differential Gut Microbiota and Fecal Metabolites Related With the Clinical Subtypes of Myasthenia Gravis |
title_full | Differential Gut Microbiota and Fecal Metabolites Related With the Clinical Subtypes of Myasthenia Gravis |
title_fullStr | Differential Gut Microbiota and Fecal Metabolites Related With the Clinical Subtypes of Myasthenia Gravis |
title_full_unstemmed | Differential Gut Microbiota and Fecal Metabolites Related With the Clinical Subtypes of Myasthenia Gravis |
title_short | Differential Gut Microbiota and Fecal Metabolites Related With the Clinical Subtypes of Myasthenia Gravis |
title_sort | differential gut microbiota and fecal metabolites related with the clinical subtypes of myasthenia gravis |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7506099/ https://www.ncbi.nlm.nih.gov/pubmed/33013794 http://dx.doi.org/10.3389/fmicb.2020.564579 |
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