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Transcriptomic Changes in Young Japanese Males After Exposure to Acute Hypobaric Hypoxia

After the genomic era, the development of high-throughput sequencing technologies has allowed us to advance our understanding of genetic variants responsible for adaptation to high altitude in humans. However, transcriptomic characteristics associated with phenotypic plasticity conferring tolerance...

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Autores principales: Yasukochi, Yoshiki, Shin, Sora, Wakabayashi, Hitoshi, Maeda, Takafumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7506118/
https://www.ncbi.nlm.nih.gov/pubmed/33101380
http://dx.doi.org/10.3389/fgene.2020.559074
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author Yasukochi, Yoshiki
Shin, Sora
Wakabayashi, Hitoshi
Maeda, Takafumi
author_facet Yasukochi, Yoshiki
Shin, Sora
Wakabayashi, Hitoshi
Maeda, Takafumi
author_sort Yasukochi, Yoshiki
collection PubMed
description After the genomic era, the development of high-throughput sequencing technologies has allowed us to advance our understanding of genetic variants responsible for adaptation to high altitude in humans. However, transcriptomic characteristics associated with phenotypic plasticity conferring tolerance to acute hypobaric hypoxic stress remain unclear. To elucidate the effects of hypobaric hypoxic stress on transcriptional variability, we aimed to describe transcriptomic profiles in response to acute hypobaric hypoxia in humans. In a hypobaric hypoxic chamber, young Japanese males were exposed to a barometric pressure of 493 mmHg (hypobaric hypoxia) for 75 min after resting for 30 min at the pressure of 760 mmHg (normobaric normoxia) at 28°C. Saliva samples of the subjects were collected before and after hypobaric hypoxia exposure, to be used for RNA sequencing. Differential gene expression analysis identified 30 significantly upregulated genes and some of these genes may be involved in biological processes influencing hematological or immunological responses to hypobaric hypoxic stress. We also confirmed the absence of any significant transcriptional fluctuations in the analysis of basal transcriptomic profiles under no-stimulus conditions, suggesting that the 30 genes were actually upregulated by hypobaric hypoxia exposure. In conclusion, our findings showed that the transcriptional profiles of Japanese individuals can be rapidly changed as a result of acute hypobaric hypoxia, and this change may influence the phenotypic plasticity of lowland individuals for acclimatization to a hypobaric hypoxic environment. Therefore, the results obtained in this study shed light on the transcriptional mechanisms underlying high-altitude acclimatization in humans.
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spelling pubmed-75061182020-10-22 Transcriptomic Changes in Young Japanese Males After Exposure to Acute Hypobaric Hypoxia Yasukochi, Yoshiki Shin, Sora Wakabayashi, Hitoshi Maeda, Takafumi Front Genet Genetics After the genomic era, the development of high-throughput sequencing technologies has allowed us to advance our understanding of genetic variants responsible for adaptation to high altitude in humans. However, transcriptomic characteristics associated with phenotypic plasticity conferring tolerance to acute hypobaric hypoxic stress remain unclear. To elucidate the effects of hypobaric hypoxic stress on transcriptional variability, we aimed to describe transcriptomic profiles in response to acute hypobaric hypoxia in humans. In a hypobaric hypoxic chamber, young Japanese males were exposed to a barometric pressure of 493 mmHg (hypobaric hypoxia) for 75 min after resting for 30 min at the pressure of 760 mmHg (normobaric normoxia) at 28°C. Saliva samples of the subjects were collected before and after hypobaric hypoxia exposure, to be used for RNA sequencing. Differential gene expression analysis identified 30 significantly upregulated genes and some of these genes may be involved in biological processes influencing hematological or immunological responses to hypobaric hypoxic stress. We also confirmed the absence of any significant transcriptional fluctuations in the analysis of basal transcriptomic profiles under no-stimulus conditions, suggesting that the 30 genes were actually upregulated by hypobaric hypoxia exposure. In conclusion, our findings showed that the transcriptional profiles of Japanese individuals can be rapidly changed as a result of acute hypobaric hypoxia, and this change may influence the phenotypic plasticity of lowland individuals for acclimatization to a hypobaric hypoxic environment. Therefore, the results obtained in this study shed light on the transcriptional mechanisms underlying high-altitude acclimatization in humans. Frontiers Media S.A. 2020-09-08 /pmc/articles/PMC7506118/ /pubmed/33101380 http://dx.doi.org/10.3389/fgene.2020.559074 Text en Copyright © 2020 Yasukochi, Shin, Wakabayashi and Maeda. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Yasukochi, Yoshiki
Shin, Sora
Wakabayashi, Hitoshi
Maeda, Takafumi
Transcriptomic Changes in Young Japanese Males After Exposure to Acute Hypobaric Hypoxia
title Transcriptomic Changes in Young Japanese Males After Exposure to Acute Hypobaric Hypoxia
title_full Transcriptomic Changes in Young Japanese Males After Exposure to Acute Hypobaric Hypoxia
title_fullStr Transcriptomic Changes in Young Japanese Males After Exposure to Acute Hypobaric Hypoxia
title_full_unstemmed Transcriptomic Changes in Young Japanese Males After Exposure to Acute Hypobaric Hypoxia
title_short Transcriptomic Changes in Young Japanese Males After Exposure to Acute Hypobaric Hypoxia
title_sort transcriptomic changes in young japanese males after exposure to acute hypobaric hypoxia
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7506118/
https://www.ncbi.nlm.nih.gov/pubmed/33101380
http://dx.doi.org/10.3389/fgene.2020.559074
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