Cargando…
Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7
The genome of Escherichia coli O157:H7 bacteriophage vB_EcoM_CBA120 encodes four distinct tailspike proteins (TSPs). The four TSPs, TSP1-4, attach to the phage baseplate forming a branched structure. We report the 1.9 Å resolution crystal structure of TSP2 (ORF211), the TSP that confers phage specif...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7506556/ https://www.ncbi.nlm.nih.gov/pubmed/32958885 http://dx.doi.org/10.1038/s41598-020-72373-0 |
_version_ | 1783585041987665920 |
---|---|
author | Greenfield, Julia Shang, Xiaoran Luo, Heng Zhou, Yan Linden, Sara B. Heselpoth, Ryan D. Leiman, Petr G. Nelson, Daniel C. Herzberg, Osnat |
author_facet | Greenfield, Julia Shang, Xiaoran Luo, Heng Zhou, Yan Linden, Sara B. Heselpoth, Ryan D. Leiman, Petr G. Nelson, Daniel C. Herzberg, Osnat |
author_sort | Greenfield, Julia |
collection | PubMed |
description | The genome of Escherichia coli O157:H7 bacteriophage vB_EcoM_CBA120 encodes four distinct tailspike proteins (TSPs). The four TSPs, TSP1-4, attach to the phage baseplate forming a branched structure. We report the 1.9 Å resolution crystal structure of TSP2 (ORF211), the TSP that confers phage specificity towards E. coli O157:H7. The structure shows that the N-terminal 168 residues involved in TSPs complex assembly are disordered in the absence of partner proteins. The ensuing head domain contains only the first of two fold modules seen in other phage vB_EcoM_CBA120 TSPs. The catalytic site resides in a cleft at the interface between adjacent trimer subunits, where Asp506, Glu568, and Asp571 are located in close proximity. Replacement of Asp506 and Asp571 for alanine residues abolishes enzyme activity, thus identifying the acid/base catalytic machinery. However, activity remains intact when Asp506 and Asp571 are mutated into asparagine residues. Analysis of additional site-directed mutants in the background of the D506N:D571N mutant suggests engagement of an alternative catalytic apparatus comprising Glu568 and Tyr623. Finally, we demonstrate the catalytic role of two interacting glutamate residues of TSP1, located in a cleft between two trimer subunits, Glu456 and Glu483, underscoring the diversity of the catalytic apparatus employed by phage vB_EcoM_CBA120 TSPs. |
format | Online Article Text |
id | pubmed-7506556 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-75065562020-09-24 Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7 Greenfield, Julia Shang, Xiaoran Luo, Heng Zhou, Yan Linden, Sara B. Heselpoth, Ryan D. Leiman, Petr G. Nelson, Daniel C. Herzberg, Osnat Sci Rep Article The genome of Escherichia coli O157:H7 bacteriophage vB_EcoM_CBA120 encodes four distinct tailspike proteins (TSPs). The four TSPs, TSP1-4, attach to the phage baseplate forming a branched structure. We report the 1.9 Å resolution crystal structure of TSP2 (ORF211), the TSP that confers phage specificity towards E. coli O157:H7. The structure shows that the N-terminal 168 residues involved in TSPs complex assembly are disordered in the absence of partner proteins. The ensuing head domain contains only the first of two fold modules seen in other phage vB_EcoM_CBA120 TSPs. The catalytic site resides in a cleft at the interface between adjacent trimer subunits, where Asp506, Glu568, and Asp571 are located in close proximity. Replacement of Asp506 and Asp571 for alanine residues abolishes enzyme activity, thus identifying the acid/base catalytic machinery. However, activity remains intact when Asp506 and Asp571 are mutated into asparagine residues. Analysis of additional site-directed mutants in the background of the D506N:D571N mutant suggests engagement of an alternative catalytic apparatus comprising Glu568 and Tyr623. Finally, we demonstrate the catalytic role of two interacting glutamate residues of TSP1, located in a cleft between two trimer subunits, Glu456 and Glu483, underscoring the diversity of the catalytic apparatus employed by phage vB_EcoM_CBA120 TSPs. Nature Publishing Group UK 2020-09-21 /pmc/articles/PMC7506556/ /pubmed/32958885 http://dx.doi.org/10.1038/s41598-020-72373-0 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Greenfield, Julia Shang, Xiaoran Luo, Heng Zhou, Yan Linden, Sara B. Heselpoth, Ryan D. Leiman, Petr G. Nelson, Daniel C. Herzberg, Osnat Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7 |
title | Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7 |
title_full | Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7 |
title_fullStr | Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7 |
title_full_unstemmed | Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7 |
title_short | Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7 |
title_sort | structure and function of bacteriophage cba120 orf211 (tsp2), the determinant of phage specificity towards e. coli o157:h7 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7506556/ https://www.ncbi.nlm.nih.gov/pubmed/32958885 http://dx.doi.org/10.1038/s41598-020-72373-0 |
work_keys_str_mv | AT greenfieldjulia structureandfunctionofbacteriophagecba120orf211tsp2thedeterminantofphagespecificitytowardsecolio157h7 AT shangxiaoran structureandfunctionofbacteriophagecba120orf211tsp2thedeterminantofphagespecificitytowardsecolio157h7 AT luoheng structureandfunctionofbacteriophagecba120orf211tsp2thedeterminantofphagespecificitytowardsecolio157h7 AT zhouyan structureandfunctionofbacteriophagecba120orf211tsp2thedeterminantofphagespecificitytowardsecolio157h7 AT lindensarab structureandfunctionofbacteriophagecba120orf211tsp2thedeterminantofphagespecificitytowardsecolio157h7 AT heselpothryand structureandfunctionofbacteriophagecba120orf211tsp2thedeterminantofphagespecificitytowardsecolio157h7 AT leimanpetrg structureandfunctionofbacteriophagecba120orf211tsp2thedeterminantofphagespecificitytowardsecolio157h7 AT nelsondanielc structureandfunctionofbacteriophagecba120orf211tsp2thedeterminantofphagespecificitytowardsecolio157h7 AT herzbergosnat structureandfunctionofbacteriophagecba120orf211tsp2thedeterminantofphagespecificitytowardsecolio157h7 |