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Semiparametric estimation of the attributable fraction when there are interactions under monotonicity constraints
BACKGROUND: The population attributable fraction (PAF) is the fraction of disease cases in a sample that can be attributed to an exposure. Estimating the PAF often involves the estimation of the probability of having the disease given the exposure while adjusting for confounders. In many settings, t...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7507656/ https://www.ncbi.nlm.nih.gov/pubmed/32957931 http://dx.doi.org/10.1186/s12874-020-01118-4 |
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author | Wang, Wei Small, Dylan S. Harhay, Michael O. |
author_facet | Wang, Wei Small, Dylan S. Harhay, Michael O. |
author_sort | Wang, Wei |
collection | PubMed |
description | BACKGROUND: The population attributable fraction (PAF) is the fraction of disease cases in a sample that can be attributed to an exposure. Estimating the PAF often involves the estimation of the probability of having the disease given the exposure while adjusting for confounders. In many settings, the exposure can interact with confounders. Additionally, the exposure may have a monotone effect on the probability of having the disease, and this effect is not necessarily linear. METHODS: We develop a semiparametric approach for estimating the probability of having the disease and, consequently, for estimating the PAF, controlling for the interaction between the exposure and a confounder. We use a tensor product of univariate B-splines to model the interaction under the monotonicity constraint. The model fitting procedure is formulated as a quadratic programming problem, and, thus, can be easily solved using standard optimization packages. We conduct simulations to compare the performance of the developed approach with the conventional B-splines approach without the monotonicity constraint, and with the logistic regression approach. To illustrate our method, we estimate the PAF of hopelessness and depression for suicidal ideation among elderly depressed patients. RESULTS: The proposed estimator exhibited better performance than the other two approaches in the simulation settings we tried. The estimated PAF attributable to hopelessness is 67.99% with 95% confidence interval: 42.10% to 97.42%, and is 22.36% with 95% confidence interval: 12.77% to 56.49% due to depression. CONCLUSIONS: The developed approach is easy to implement and supports flexible modeling of possible non-linear relationships between a disease and an exposure of interest. |
format | Online Article Text |
id | pubmed-7507656 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-75076562020-09-23 Semiparametric estimation of the attributable fraction when there are interactions under monotonicity constraints Wang, Wei Small, Dylan S. Harhay, Michael O. BMC Med Res Methodol Technical Advance BACKGROUND: The population attributable fraction (PAF) is the fraction of disease cases in a sample that can be attributed to an exposure. Estimating the PAF often involves the estimation of the probability of having the disease given the exposure while adjusting for confounders. In many settings, the exposure can interact with confounders. Additionally, the exposure may have a monotone effect on the probability of having the disease, and this effect is not necessarily linear. METHODS: We develop a semiparametric approach for estimating the probability of having the disease and, consequently, for estimating the PAF, controlling for the interaction between the exposure and a confounder. We use a tensor product of univariate B-splines to model the interaction under the monotonicity constraint. The model fitting procedure is formulated as a quadratic programming problem, and, thus, can be easily solved using standard optimization packages. We conduct simulations to compare the performance of the developed approach with the conventional B-splines approach without the monotonicity constraint, and with the logistic regression approach. To illustrate our method, we estimate the PAF of hopelessness and depression for suicidal ideation among elderly depressed patients. RESULTS: The proposed estimator exhibited better performance than the other two approaches in the simulation settings we tried. The estimated PAF attributable to hopelessness is 67.99% with 95% confidence interval: 42.10% to 97.42%, and is 22.36% with 95% confidence interval: 12.77% to 56.49% due to depression. CONCLUSIONS: The developed approach is easy to implement and supports flexible modeling of possible non-linear relationships between a disease and an exposure of interest. BioMed Central 2020-09-21 /pmc/articles/PMC7507656/ /pubmed/32957931 http://dx.doi.org/10.1186/s12874-020-01118-4 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Technical Advance Wang, Wei Small, Dylan S. Harhay, Michael O. Semiparametric estimation of the attributable fraction when there are interactions under monotonicity constraints |
title | Semiparametric estimation of the attributable fraction when there are interactions under monotonicity constraints |
title_full | Semiparametric estimation of the attributable fraction when there are interactions under monotonicity constraints |
title_fullStr | Semiparametric estimation of the attributable fraction when there are interactions under monotonicity constraints |
title_full_unstemmed | Semiparametric estimation of the attributable fraction when there are interactions under monotonicity constraints |
title_short | Semiparametric estimation of the attributable fraction when there are interactions under monotonicity constraints |
title_sort | semiparametric estimation of the attributable fraction when there are interactions under monotonicity constraints |
topic | Technical Advance |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7507656/ https://www.ncbi.nlm.nih.gov/pubmed/32957931 http://dx.doi.org/10.1186/s12874-020-01118-4 |
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