Cargando…

Recognition of Cutaneous Melanoma on Digitized Histopathological Slides via Artificial Intelligence Algorithm

Increasing incidence of skin cancer combined with a shortage of dermatopathologists has increased the workload of pathology departments worldwide. In addition, the high intraobserver and interobserver variability in the assessment of melanocytic skin lesions can result in underestimated or overestim...

Descripción completa

Detalles Bibliográficos
Autores principales: De Logu, Francesco, Ugolini, Filippo, Maio, Vincenza, Simi, Sara, Cossu, Antonio, Massi, Daniela, Nassini, Romina, Laurino, Marco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508308/
https://www.ncbi.nlm.nih.gov/pubmed/33014803
http://dx.doi.org/10.3389/fonc.2020.01559
_version_ 1783585398999482368
author De Logu, Francesco
Ugolini, Filippo
Maio, Vincenza
Simi, Sara
Cossu, Antonio
Massi, Daniela
Nassini, Romina
Laurino, Marco
author_facet De Logu, Francesco
Ugolini, Filippo
Maio, Vincenza
Simi, Sara
Cossu, Antonio
Massi, Daniela
Nassini, Romina
Laurino, Marco
author_sort De Logu, Francesco
collection PubMed
description Increasing incidence of skin cancer combined with a shortage of dermatopathologists has increased the workload of pathology departments worldwide. In addition, the high intraobserver and interobserver variability in the assessment of melanocytic skin lesions can result in underestimated or overestimated diagnosis of melanoma. Thus, the development of new techniques for skin tumor diagnosis is essential to assist pathologists to standardize diagnoses and plan accurate patient treatment. Here, we describe the development of an artificial intelligence (AI) system that recognizes cutaneous melanoma from histopathological digitalized slides with clinically acceptable accuracy. Whole-slide digital images from 100 formalin-fixed paraffin-embedded primary cutaneous melanoma were used to train a convolutional neural network (CNN) based on a pretrained Inception-ResNet-v2 to accurately and automatically differentiate tumoral areas from healthy tissue. The CNN was trained by using 60 digital slides in which regions of interest (ROIs) of tumoral and healthy tissue were extracted by experienced dermatopathologists, while the other 40 slides were used as test datasets. A total of 1377 patches of healthy tissue and 2141 patches of melanoma were assessed in the training/validation set, while 791 patches of healthy tissue and 1122 patches of pathological tissue were evaluated in the test dataset. Considering the classification by expert dermatopathologists as reference, the trained deep net showed high accuracy (96.5%), sensitivity (95.7%), specificity (97.7%), F(1) score (96.5%), and a Cohen’s kappa of 0.929. Our data show that a deep learning system can be trained to recognize melanoma samples, achieving accuracies comparable to experienced dermatopathologists. Such an approach can offer a valuable aid in improving diagnostic efficiency when expert consultation is not available, as well as reducing interobserver variability. Further studies in larger data sets are necessary to verify whether the deep learning algorithm allows subclassification of different melanoma subtypes.
format Online
Article
Text
id pubmed-7508308
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-75083082020-10-02 Recognition of Cutaneous Melanoma on Digitized Histopathological Slides via Artificial Intelligence Algorithm De Logu, Francesco Ugolini, Filippo Maio, Vincenza Simi, Sara Cossu, Antonio Massi, Daniela Nassini, Romina Laurino, Marco Front Oncol Oncology Increasing incidence of skin cancer combined with a shortage of dermatopathologists has increased the workload of pathology departments worldwide. In addition, the high intraobserver and interobserver variability in the assessment of melanocytic skin lesions can result in underestimated or overestimated diagnosis of melanoma. Thus, the development of new techniques for skin tumor diagnosis is essential to assist pathologists to standardize diagnoses and plan accurate patient treatment. Here, we describe the development of an artificial intelligence (AI) system that recognizes cutaneous melanoma from histopathological digitalized slides with clinically acceptable accuracy. Whole-slide digital images from 100 formalin-fixed paraffin-embedded primary cutaneous melanoma were used to train a convolutional neural network (CNN) based on a pretrained Inception-ResNet-v2 to accurately and automatically differentiate tumoral areas from healthy tissue. The CNN was trained by using 60 digital slides in which regions of interest (ROIs) of tumoral and healthy tissue were extracted by experienced dermatopathologists, while the other 40 slides were used as test datasets. A total of 1377 patches of healthy tissue and 2141 patches of melanoma were assessed in the training/validation set, while 791 patches of healthy tissue and 1122 patches of pathological tissue were evaluated in the test dataset. Considering the classification by expert dermatopathologists as reference, the trained deep net showed high accuracy (96.5%), sensitivity (95.7%), specificity (97.7%), F(1) score (96.5%), and a Cohen’s kappa of 0.929. Our data show that a deep learning system can be trained to recognize melanoma samples, achieving accuracies comparable to experienced dermatopathologists. Such an approach can offer a valuable aid in improving diagnostic efficiency when expert consultation is not available, as well as reducing interobserver variability. Further studies in larger data sets are necessary to verify whether the deep learning algorithm allows subclassification of different melanoma subtypes. Frontiers Media S.A. 2020-08-20 /pmc/articles/PMC7508308/ /pubmed/33014803 http://dx.doi.org/10.3389/fonc.2020.01559 Text en Copyright © 2020 De Logu, Ugolini, Maio, Simi, Cossu, Massi, Italian Association for Cancer Research (AIRC) Study Group, Nassini and Laurino. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
De Logu, Francesco
Ugolini, Filippo
Maio, Vincenza
Simi, Sara
Cossu, Antonio
Massi, Daniela
Nassini, Romina
Laurino, Marco
Recognition of Cutaneous Melanoma on Digitized Histopathological Slides via Artificial Intelligence Algorithm
title Recognition of Cutaneous Melanoma on Digitized Histopathological Slides via Artificial Intelligence Algorithm
title_full Recognition of Cutaneous Melanoma on Digitized Histopathological Slides via Artificial Intelligence Algorithm
title_fullStr Recognition of Cutaneous Melanoma on Digitized Histopathological Slides via Artificial Intelligence Algorithm
title_full_unstemmed Recognition of Cutaneous Melanoma on Digitized Histopathological Slides via Artificial Intelligence Algorithm
title_short Recognition of Cutaneous Melanoma on Digitized Histopathological Slides via Artificial Intelligence Algorithm
title_sort recognition of cutaneous melanoma on digitized histopathological slides via artificial intelligence algorithm
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508308/
https://www.ncbi.nlm.nih.gov/pubmed/33014803
http://dx.doi.org/10.3389/fonc.2020.01559
work_keys_str_mv AT delogufrancesco recognitionofcutaneousmelanomaondigitizedhistopathologicalslidesviaartificialintelligencealgorithm
AT ugolinifilippo recognitionofcutaneousmelanomaondigitizedhistopathologicalslidesviaartificialintelligencealgorithm
AT maiovincenza recognitionofcutaneousmelanomaondigitizedhistopathologicalslidesviaartificialintelligencealgorithm
AT simisara recognitionofcutaneousmelanomaondigitizedhistopathologicalslidesviaartificialintelligencealgorithm
AT cossuantonio recognitionofcutaneousmelanomaondigitizedhistopathologicalslidesviaartificialintelligencealgorithm
AT massidaniela recognitionofcutaneousmelanomaondigitizedhistopathologicalslidesviaartificialintelligencealgorithm
AT recognitionofcutaneousmelanomaondigitizedhistopathologicalslidesviaartificialintelligencealgorithm
AT nassiniromina recognitionofcutaneousmelanomaondigitizedhistopathologicalslidesviaartificialintelligencealgorithm
AT laurinomarco recognitionofcutaneousmelanomaondigitizedhistopathologicalslidesviaartificialintelligencealgorithm