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TS-Extractor: large graph exploration via subgraph extraction based on topological and semantic information

Exploring large graphs is difficult due to their large size and semantic information such as node attributes. Extracting only a subgraph relevant to the user-specified nodes (called focus nodes) is an effective strategy for exploring a large graph. However, existing approaches following this strateg...

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Detalles Bibliográficos
Autores principales: Fu, Kun, Mao, Tingyun, Wang, Yang, Lin, Daoyu, Zhang, Yuanben, Zhan, Junjian, Sun, Xian, Li, Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508425/
https://www.ncbi.nlm.nih.gov/pubmed/32982559
http://dx.doi.org/10.1007/s12650-020-00699-y
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author Fu, Kun
Mao, Tingyun
Wang, Yang
Lin, Daoyu
Zhang, Yuanben
Zhan, Junjian
Sun, Xian
Li, Feng
author_facet Fu, Kun
Mao, Tingyun
Wang, Yang
Lin, Daoyu
Zhang, Yuanben
Zhan, Junjian
Sun, Xian
Li, Feng
author_sort Fu, Kun
collection PubMed
description Exploring large graphs is difficult due to their large size and semantic information such as node attributes. Extracting only a subgraph relevant to the user-specified nodes (called focus nodes) is an effective strategy for exploring a large graph. However, existing approaches following this strategy mainly focus on graph topology and do not fully consider node attributes, resulting in the lack of clear semantics in the extracted subgraphs. In this paper, we propose a novel approach called TS-Extractor that can extract a relevant subgraph around the user-selected focus nodes to help the user explore the large graph from a local perspective. By combining the graph topology and the user-selected node attributes, TS-Extractor can extract and visualize a connected subgraph that contains as many nodes sharing the same/similar attribute values with the focus nodes as possible, thereby providing the user with clear semantics. Based on TS-Extractor, we develop a Web-based graph exploration system that allows users to interactively extract, analyze and expand subgraphs. Through two case studies and a user study, we demonstrate the usability and effectiveness of TS-Extractor. GRAPHIC ABSTRACT: [Image: see text]
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spelling pubmed-75084252020-09-23 TS-Extractor: large graph exploration via subgraph extraction based on topological and semantic information Fu, Kun Mao, Tingyun Wang, Yang Lin, Daoyu Zhang, Yuanben Zhan, Junjian Sun, Xian Li, Feng J Vis (Tokyo) Regular Paper Exploring large graphs is difficult due to their large size and semantic information such as node attributes. Extracting only a subgraph relevant to the user-specified nodes (called focus nodes) is an effective strategy for exploring a large graph. However, existing approaches following this strategy mainly focus on graph topology and do not fully consider node attributes, resulting in the lack of clear semantics in the extracted subgraphs. In this paper, we propose a novel approach called TS-Extractor that can extract a relevant subgraph around the user-selected focus nodes to help the user explore the large graph from a local perspective. By combining the graph topology and the user-selected node attributes, TS-Extractor can extract and visualize a connected subgraph that contains as many nodes sharing the same/similar attribute values with the focus nodes as possible, thereby providing the user with clear semantics. Based on TS-Extractor, we develop a Web-based graph exploration system that allows users to interactively extract, analyze and expand subgraphs. Through two case studies and a user study, we demonstrate the usability and effectiveness of TS-Extractor. GRAPHIC ABSTRACT: [Image: see text] Springer Berlin Heidelberg 2020-09-22 2021 /pmc/articles/PMC7508425/ /pubmed/32982559 http://dx.doi.org/10.1007/s12650-020-00699-y Text en © The Visualization Society of Japan 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Regular Paper
Fu, Kun
Mao, Tingyun
Wang, Yang
Lin, Daoyu
Zhang, Yuanben
Zhan, Junjian
Sun, Xian
Li, Feng
TS-Extractor: large graph exploration via subgraph extraction based on topological and semantic information
title TS-Extractor: large graph exploration via subgraph extraction based on topological and semantic information
title_full TS-Extractor: large graph exploration via subgraph extraction based on topological and semantic information
title_fullStr TS-Extractor: large graph exploration via subgraph extraction based on topological and semantic information
title_full_unstemmed TS-Extractor: large graph exploration via subgraph extraction based on topological and semantic information
title_short TS-Extractor: large graph exploration via subgraph extraction based on topological and semantic information
title_sort ts-extractor: large graph exploration via subgraph extraction based on topological and semantic information
topic Regular Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508425/
https://www.ncbi.nlm.nih.gov/pubmed/32982559
http://dx.doi.org/10.1007/s12650-020-00699-y
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