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Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received
Sepsis is not a monolithic disease, but a loose collection of symptoms with diverse outcomes. Thus, stratification and subtyping of sepsis patients is of great importance. We examine the temporal evolution of patient state using our previously-published method for computing risk of transition from s...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508552/ https://www.ncbi.nlm.nih.gov/pubmed/32959779 http://dx.doi.org/10.7554/eLife.58142 |
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author | Liu, Ran Greenstein, Joseph L Fackler, James C Bembea, Melania M Winslow, Raimond L |
author_facet | Liu, Ran Greenstein, Joseph L Fackler, James C Bembea, Melania M Winslow, Raimond L |
author_sort | Liu, Ran |
collection | PubMed |
description | Sepsis is not a monolithic disease, but a loose collection of symptoms with diverse outcomes. Thus, stratification and subtyping of sepsis patients is of great importance. We examine the temporal evolution of patient state using our previously-published method for computing risk of transition from sepsis into septic shock. Risk trajectories diverge into four clusters following early prediction of septic shock, stratifying by outcome: the highest-risk and lowest-risk groups have a 76.5% and 10.4% prevalence of septic shock, and 43% and 18% mortality, respectively. These clusters differ also in treatments received and median time to shock onset. Analyses reveal the existence of a rapid (30–60 min) transition in risk at the time of threshold crossing. We hypothesize that this transition occurs as a result of the failure of compensatory biological systems to cope with infection, resulting in a bifurcation of low to high risk. Such a collapse, we believe, represents the true onset of septic shock. Thus, this rapid elevation in risk represents a potential new data-driven definition of septic shock. |
format | Online Article Text |
id | pubmed-7508552 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-75085522020-09-23 Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received Liu, Ran Greenstein, Joseph L Fackler, James C Bembea, Melania M Winslow, Raimond L eLife Computational and Systems Biology Sepsis is not a monolithic disease, but a loose collection of symptoms with diverse outcomes. Thus, stratification and subtyping of sepsis patients is of great importance. We examine the temporal evolution of patient state using our previously-published method for computing risk of transition from sepsis into septic shock. Risk trajectories diverge into four clusters following early prediction of septic shock, stratifying by outcome: the highest-risk and lowest-risk groups have a 76.5% and 10.4% prevalence of septic shock, and 43% and 18% mortality, respectively. These clusters differ also in treatments received and median time to shock onset. Analyses reveal the existence of a rapid (30–60 min) transition in risk at the time of threshold crossing. We hypothesize that this transition occurs as a result of the failure of compensatory biological systems to cope with infection, resulting in a bifurcation of low to high risk. Such a collapse, we believe, represents the true onset of septic shock. Thus, this rapid elevation in risk represents a potential new data-driven definition of septic shock. eLife Sciences Publications, Ltd 2020-09-22 /pmc/articles/PMC7508552/ /pubmed/32959779 http://dx.doi.org/10.7554/eLife.58142 Text en © 2020, Liu et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Computational and Systems Biology Liu, Ran Greenstein, Joseph L Fackler, James C Bembea, Melania M Winslow, Raimond L Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received |
title | Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received |
title_full | Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received |
title_fullStr | Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received |
title_full_unstemmed | Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received |
title_short | Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received |
title_sort | spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received |
topic | Computational and Systems Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508552/ https://www.ncbi.nlm.nih.gov/pubmed/32959779 http://dx.doi.org/10.7554/eLife.58142 |
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