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Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received

Sepsis is not a monolithic disease, but a loose collection of symptoms with diverse outcomes. Thus, stratification and subtyping of sepsis patients is of great importance. We examine the temporal evolution of patient state using our previously-published method for computing risk of transition from s...

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Autores principales: Liu, Ran, Greenstein, Joseph L, Fackler, James C, Bembea, Melania M, Winslow, Raimond L
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508552/
https://www.ncbi.nlm.nih.gov/pubmed/32959779
http://dx.doi.org/10.7554/eLife.58142
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author Liu, Ran
Greenstein, Joseph L
Fackler, James C
Bembea, Melania M
Winslow, Raimond L
author_facet Liu, Ran
Greenstein, Joseph L
Fackler, James C
Bembea, Melania M
Winslow, Raimond L
author_sort Liu, Ran
collection PubMed
description Sepsis is not a monolithic disease, but a loose collection of symptoms with diverse outcomes. Thus, stratification and subtyping of sepsis patients is of great importance. We examine the temporal evolution of patient state using our previously-published method for computing risk of transition from sepsis into septic shock. Risk trajectories diverge into four clusters following early prediction of septic shock, stratifying by outcome: the highest-risk and lowest-risk groups have a 76.5% and 10.4% prevalence of septic shock, and 43% and 18% mortality, respectively. These clusters differ also in treatments received and median time to shock onset. Analyses reveal the existence of a rapid (30–60 min) transition in risk at the time of threshold crossing. We hypothesize that this transition occurs as a result of the failure of compensatory biological systems to cope with infection, resulting in a bifurcation of low to high risk. Such a collapse, we believe, represents the true onset of septic shock. Thus, this rapid elevation in risk represents a potential new data-driven definition of septic shock.
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spelling pubmed-75085522020-09-23 Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received Liu, Ran Greenstein, Joseph L Fackler, James C Bembea, Melania M Winslow, Raimond L eLife Computational and Systems Biology Sepsis is not a monolithic disease, but a loose collection of symptoms with diverse outcomes. Thus, stratification and subtyping of sepsis patients is of great importance. We examine the temporal evolution of patient state using our previously-published method for computing risk of transition from sepsis into septic shock. Risk trajectories diverge into four clusters following early prediction of septic shock, stratifying by outcome: the highest-risk and lowest-risk groups have a 76.5% and 10.4% prevalence of septic shock, and 43% and 18% mortality, respectively. These clusters differ also in treatments received and median time to shock onset. Analyses reveal the existence of a rapid (30–60 min) transition in risk at the time of threshold crossing. We hypothesize that this transition occurs as a result of the failure of compensatory biological systems to cope with infection, resulting in a bifurcation of low to high risk. Such a collapse, we believe, represents the true onset of septic shock. Thus, this rapid elevation in risk represents a potential new data-driven definition of septic shock. eLife Sciences Publications, Ltd 2020-09-22 /pmc/articles/PMC7508552/ /pubmed/32959779 http://dx.doi.org/10.7554/eLife.58142 Text en © 2020, Liu et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Computational and Systems Biology
Liu, Ran
Greenstein, Joseph L
Fackler, James C
Bembea, Melania M
Winslow, Raimond L
Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received
title Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received
title_full Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received
title_fullStr Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received
title_full_unstemmed Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received
title_short Spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received
title_sort spectral clustering of risk score trajectories stratifies sepsis patients by clinical outcome and interventions received
topic Computational and Systems Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508552/
https://www.ncbi.nlm.nih.gov/pubmed/32959779
http://dx.doi.org/10.7554/eLife.58142
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