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Melt crystallization mechanism analyzed with dimensional reduction of high-dimensional data representing distribution function geometries
Melt crystallization is essential to many industrial processes, including semiconductor, ice, and food manufacturing. Nevertheless, our understanding of the melt crystallization mechanism remains poor. This is because the molecular-scale structures of melts are difficult to clarify experimentally. C...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508891/ https://www.ncbi.nlm.nih.gov/pubmed/32963268 http://dx.doi.org/10.1038/s41598-020-72455-z |
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author | Nada, Hiroki |
author_facet | Nada, Hiroki |
author_sort | Nada, Hiroki |
collection | PubMed |
description | Melt crystallization is essential to many industrial processes, including semiconductor, ice, and food manufacturing. Nevertheless, our understanding of the melt crystallization mechanism remains poor. This is because the molecular-scale structures of melts are difficult to clarify experimentally. Computer simulations, such as molecular dynamics (MD), are often used to investigate melt structures. However, the time evolution of the structural order in a melt during crystallization must be analyzed properly. In this study, dimensional reduction (DR), which is an unsupervised machine learning technique, is used to evaluate the time evolution of structural order. The DR is performed for high-dimensional data representing an atom–atom pair distribution function and the distribution function of the angle formed by three nearest neighboring atoms at each period during crystallization, which are obtained by an MD simulation of a supercooled Lennard–Jones melt. The results indicate that crystallization occurs via the following activation processes: nucleation of a crystal with a distorted structure and reconstruction of the crystal to a more stable structure. The time evolution of the local structures during crystallization is also evaluated with this method. The present method can be applied to studies of the mechanism of crystallization from a disordered system for real materials, even for complicated multicomponent materials. |
format | Online Article Text |
id | pubmed-7508891 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-75088912020-09-24 Melt crystallization mechanism analyzed with dimensional reduction of high-dimensional data representing distribution function geometries Nada, Hiroki Sci Rep Article Melt crystallization is essential to many industrial processes, including semiconductor, ice, and food manufacturing. Nevertheless, our understanding of the melt crystallization mechanism remains poor. This is because the molecular-scale structures of melts are difficult to clarify experimentally. Computer simulations, such as molecular dynamics (MD), are often used to investigate melt structures. However, the time evolution of the structural order in a melt during crystallization must be analyzed properly. In this study, dimensional reduction (DR), which is an unsupervised machine learning technique, is used to evaluate the time evolution of structural order. The DR is performed for high-dimensional data representing an atom–atom pair distribution function and the distribution function of the angle formed by three nearest neighboring atoms at each period during crystallization, which are obtained by an MD simulation of a supercooled Lennard–Jones melt. The results indicate that crystallization occurs via the following activation processes: nucleation of a crystal with a distorted structure and reconstruction of the crystal to a more stable structure. The time evolution of the local structures during crystallization is also evaluated with this method. The present method can be applied to studies of the mechanism of crystallization from a disordered system for real materials, even for complicated multicomponent materials. Nature Publishing Group UK 2020-09-22 /pmc/articles/PMC7508891/ /pubmed/32963268 http://dx.doi.org/10.1038/s41598-020-72455-z Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Nada, Hiroki Melt crystallization mechanism analyzed with dimensional reduction of high-dimensional data representing distribution function geometries |
title | Melt crystallization mechanism analyzed with dimensional reduction of high-dimensional data representing distribution function geometries |
title_full | Melt crystallization mechanism analyzed with dimensional reduction of high-dimensional data representing distribution function geometries |
title_fullStr | Melt crystallization mechanism analyzed with dimensional reduction of high-dimensional data representing distribution function geometries |
title_full_unstemmed | Melt crystallization mechanism analyzed with dimensional reduction of high-dimensional data representing distribution function geometries |
title_short | Melt crystallization mechanism analyzed with dimensional reduction of high-dimensional data representing distribution function geometries |
title_sort | melt crystallization mechanism analyzed with dimensional reduction of high-dimensional data representing distribution function geometries |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7508891/ https://www.ncbi.nlm.nih.gov/pubmed/32963268 http://dx.doi.org/10.1038/s41598-020-72455-z |
work_keys_str_mv | AT nadahiroki meltcrystallizationmechanismanalyzedwithdimensionalreductionofhighdimensionaldatarepresentingdistributionfunctiongeometries |