Phylogenetic analyses of Lycium chinense (Solanaceae) and its coordinal species applying chloroplast genome

Lycium chinense is an important edible and medicinal plant. Now, the complete chloroplast (cp) genome of L. chinense was assembled based on the Illumina sequencing reads. The cp genome of L. chinense was 155,736 bp long and contained two short inverted repeat regions (25,469 bp), which were separate...

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Autores principales: He, Shui-Lian, Tian, Yang, Yang, Yang, Shi, Chong-Ying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510570/
https://www.ncbi.nlm.nih.gov/pubmed/33366971
http://dx.doi.org/10.1080/23802359.2019.1669087
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author He, Shui-Lian
Tian, Yang
Yang, Yang
Shi, Chong-Ying
author_facet He, Shui-Lian
Tian, Yang
Yang, Yang
Shi, Chong-Ying
author_sort He, Shui-Lian
collection PubMed
description Lycium chinense is an important edible and medicinal plant. Now, the complete chloroplast (cp) genome of L. chinense was assembled based on the Illumina sequencing reads. The cp genome of L. chinense was 155,736 bp long and contained two short inverted repeat regions (25,469 bp), which were separated by a small single-copy region (18,206 bp) and a large single-copy region (86,592 bp). The cp genome encodes 113 unique genes, including 79 protein-coding genes, 30 transfer RNA genes, and 4 ribosomal RNA genes. The topology of the phylogenetic tree showed that L. chinense is closely clustered with species Lycium ruthenicum and Lycium barbarum.
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spelling pubmed-75105702020-12-22 Phylogenetic analyses of Lycium chinense (Solanaceae) and its coordinal species applying chloroplast genome He, Shui-Lian Tian, Yang Yang, Yang Shi, Chong-Ying Mitochondrial DNA B Resour Mitogenome Announcement Lycium chinense is an important edible and medicinal plant. Now, the complete chloroplast (cp) genome of L. chinense was assembled based on the Illumina sequencing reads. The cp genome of L. chinense was 155,736 bp long and contained two short inverted repeat regions (25,469 bp), which were separated by a small single-copy region (18,206 bp) and a large single-copy region (86,592 bp). The cp genome encodes 113 unique genes, including 79 protein-coding genes, 30 transfer RNA genes, and 4 ribosomal RNA genes. The topology of the phylogenetic tree showed that L. chinense is closely clustered with species Lycium ruthenicum and Lycium barbarum. Taylor & Francis 2020-06-01 /pmc/articles/PMC7510570/ /pubmed/33366971 http://dx.doi.org/10.1080/23802359.2019.1669087 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
He, Shui-Lian
Tian, Yang
Yang, Yang
Shi, Chong-Ying
Phylogenetic analyses of Lycium chinense (Solanaceae) and its coordinal species applying chloroplast genome
title Phylogenetic analyses of Lycium chinense (Solanaceae) and its coordinal species applying chloroplast genome
title_full Phylogenetic analyses of Lycium chinense (Solanaceae) and its coordinal species applying chloroplast genome
title_fullStr Phylogenetic analyses of Lycium chinense (Solanaceae) and its coordinal species applying chloroplast genome
title_full_unstemmed Phylogenetic analyses of Lycium chinense (Solanaceae) and its coordinal species applying chloroplast genome
title_short Phylogenetic analyses of Lycium chinense (Solanaceae) and its coordinal species applying chloroplast genome
title_sort phylogenetic analyses of lycium chinense (solanaceae) and its coordinal species applying chloroplast genome
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510570/
https://www.ncbi.nlm.nih.gov/pubmed/33366971
http://dx.doi.org/10.1080/23802359.2019.1669087
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