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The complete chloroplast genome sequence of Populus davidiana (Salicaceae)

The complete chloroplast genome sequence of Populus davidiana was characterized from Illumina pair-end sequencing. The chloroplast genome of P. davidiana was 156,868 bp in length, containing a large single-copy region (LSC) of 84,976 bp, a small single-copy region (SSC) of 16,606 bp, and two inverte...

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Detalles Bibliográficos
Autores principales: Yu, Haiyan, Zhang, Li, Zang, Jin, Xiao, Liandong, Luo, Jiancheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510576/
https://www.ncbi.nlm.nih.gov/pubmed/33366978
http://dx.doi.org/10.1080/23802359.2020.1768937
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author Yu, Haiyan
Zhang, Li
Zang, Jin
Xiao, Liandong
Luo, Jiancheng
author_facet Yu, Haiyan
Zhang, Li
Zang, Jin
Xiao, Liandong
Luo, Jiancheng
author_sort Yu, Haiyan
collection PubMed
description The complete chloroplast genome sequence of Populus davidiana was characterized from Illumina pair-end sequencing. The chloroplast genome of P. davidiana was 156,868 bp in length, containing a large single-copy region (LSC) of 84,976 bp, a small single-copy region (SSC) of 16,606 bp, and two inverted repeat (IR) regions of 27,643 bp. The overall GC content is 30.70%, while the correponding values of the LSC, SSC, and IR regions are 64.6%, 69.2%, and 60.1%, respectively. The genome contains 131 complete genes, including 86 protein-coding genes (62 protein-coding gene species), 37 tRNA genes (29 tRNA species) and 8 rRNA genes (4 rRNA species). The Neighbour-joining phylogenetic analysis showed that P. davidiana and Populus rotundifolia clustered together as sisters to other Populus species.
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spelling pubmed-75105762020-12-22 The complete chloroplast genome sequence of Populus davidiana (Salicaceae) Yu, Haiyan Zhang, Li Zang, Jin Xiao, Liandong Luo, Jiancheng Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Populus davidiana was characterized from Illumina pair-end sequencing. The chloroplast genome of P. davidiana was 156,868 bp in length, containing a large single-copy region (LSC) of 84,976 bp, a small single-copy region (SSC) of 16,606 bp, and two inverted repeat (IR) regions of 27,643 bp. The overall GC content is 30.70%, while the correponding values of the LSC, SSC, and IR regions are 64.6%, 69.2%, and 60.1%, respectively. The genome contains 131 complete genes, including 86 protein-coding genes (62 protein-coding gene species), 37 tRNA genes (29 tRNA species) and 8 rRNA genes (4 rRNA species). The Neighbour-joining phylogenetic analysis showed that P. davidiana and Populus rotundifolia clustered together as sisters to other Populus species. Taylor & Francis 2020-05-28 /pmc/articles/PMC7510576/ /pubmed/33366978 http://dx.doi.org/10.1080/23802359.2020.1768937 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yu, Haiyan
Zhang, Li
Zang, Jin
Xiao, Liandong
Luo, Jiancheng
The complete chloroplast genome sequence of Populus davidiana (Salicaceae)
title The complete chloroplast genome sequence of Populus davidiana (Salicaceae)
title_full The complete chloroplast genome sequence of Populus davidiana (Salicaceae)
title_fullStr The complete chloroplast genome sequence of Populus davidiana (Salicaceae)
title_full_unstemmed The complete chloroplast genome sequence of Populus davidiana (Salicaceae)
title_short The complete chloroplast genome sequence of Populus davidiana (Salicaceae)
title_sort complete chloroplast genome sequence of populus davidiana (salicaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510576/
https://www.ncbi.nlm.nih.gov/pubmed/33366978
http://dx.doi.org/10.1080/23802359.2020.1768937
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