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The complete chloroplast genome sequence of Populus tremula (Salicaceae)

The complete chloroplast genome sequence of Populus tremula was characterized from Illumina pair-end sequencing. The chloroplast genome of P. tremula was 156,862 bp in length, containing a large single-copy region (LSC) of 84,971 bp, a small single-copy region (SSC) of 16,605 bp, and two inverted re...

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Detalles Bibliográficos
Autores principales: Li, Ang, Hou, Zhe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510596/
https://www.ncbi.nlm.nih.gov/pubmed/33366968
http://dx.doi.org/10.1080/23802359.2020.1768962
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author Li, Ang
Hou, Zhe
author_facet Li, Ang
Hou, Zhe
author_sort Li, Ang
collection PubMed
description The complete chloroplast genome sequence of Populus tremula was characterized from Illumina pair-end sequencing. The chloroplast genome of P. tremula was 156,862 bp in length, containing a large single-copy region (LSC) of 84,971 bp, a small single-copy region (SSC) of 16,605 bp, and two inverted repeat (IR) regions of 27,640 bp. The overall GC content is 30.69%, while the correponding values of the LSC, SSC, and IR regions are 64.5%, 69.3%, and 60.1%, respectively. The genome contains 131 complete genes, including 86 protein-coding genes (62 protein-coding gene species), 37 tRNA genes (29 tRNA species) and 8 rRNA genes (4 rRNA species). The Neighbour-joining phylogenetic analysis showed that P. tremula and Populus davidiana clustered together as sisters to other Populus species.
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spelling pubmed-75105962020-12-22 The complete chloroplast genome sequence of Populus tremula (Salicaceae) Li, Ang Hou, Zhe Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Populus tremula was characterized from Illumina pair-end sequencing. The chloroplast genome of P. tremula was 156,862 bp in length, containing a large single-copy region (LSC) of 84,971 bp, a small single-copy region (SSC) of 16,605 bp, and two inverted repeat (IR) regions of 27,640 bp. The overall GC content is 30.69%, while the correponding values of the LSC, SSC, and IR regions are 64.5%, 69.3%, and 60.1%, respectively. The genome contains 131 complete genes, including 86 protein-coding genes (62 protein-coding gene species), 37 tRNA genes (29 tRNA species) and 8 rRNA genes (4 rRNA species). The Neighbour-joining phylogenetic analysis showed that P. tremula and Populus davidiana clustered together as sisters to other Populus species. Taylor & Francis 2020-05-27 /pmc/articles/PMC7510596/ /pubmed/33366968 http://dx.doi.org/10.1080/23802359.2020.1768962 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Ang
Hou, Zhe
The complete chloroplast genome sequence of Populus tremula (Salicaceae)
title The complete chloroplast genome sequence of Populus tremula (Salicaceae)
title_full The complete chloroplast genome sequence of Populus tremula (Salicaceae)
title_fullStr The complete chloroplast genome sequence of Populus tremula (Salicaceae)
title_full_unstemmed The complete chloroplast genome sequence of Populus tremula (Salicaceae)
title_short The complete chloroplast genome sequence of Populus tremula (Salicaceae)
title_sort complete chloroplast genome sequence of populus tremula (salicaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510596/
https://www.ncbi.nlm.nih.gov/pubmed/33366968
http://dx.doi.org/10.1080/23802359.2020.1768962
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