The complete chloroplast genome sequence of Litsea cubeba

The first complete chloroplast genome (cpDNA) sequence of Litsea cubeba was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 152,725 bp in length, contains a large single-copy region (LSC) of 93,673 bp, and a small single-copy region (SSC) of 18,924 bp, which were...

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Detalles Bibliográficos
Autores principales: Wang, Qinghua, Wang, Huangyijun, Li, Yunqin, Yuan, Xiaolong, Luo, Ting, Wang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510600/
https://www.ncbi.nlm.nih.gov/pubmed/33366967
http://dx.doi.org/10.1080/23802359.2020.1768961
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author Wang, Qinghua
Wang, Huangyijun
Li, Yunqin
Yuan, Xiaolong
Luo, Ting
Wang, Yi
author_facet Wang, Qinghua
Wang, Huangyijun
Li, Yunqin
Yuan, Xiaolong
Luo, Ting
Wang, Yi
author_sort Wang, Qinghua
collection PubMed
description The first complete chloroplast genome (cpDNA) sequence of Litsea cubeba was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 152,725 bp in length, contains a large single-copy region (LSC) of 93,673 bp, and a small single-copy region (SSC) of 18,924 bp, which were separated by a pair of inverted repeats (IR) regions of 20,064 bp, each. The genome contains 126 genes, including 82 protein-coding genes, 8 ribosomal RNA genes, and 36 transfer RNA genes. The further phylogenomic analysis showed that L. cubeba and Litsea garrettii clustered in a clade in Lauraceae family.
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spelling pubmed-75106002020-12-22 The complete chloroplast genome sequence of Litsea cubeba Wang, Qinghua Wang, Huangyijun Li, Yunqin Yuan, Xiaolong Luo, Ting Wang, Yi Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome (cpDNA) sequence of Litsea cubeba was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 152,725 bp in length, contains a large single-copy region (LSC) of 93,673 bp, and a small single-copy region (SSC) of 18,924 bp, which were separated by a pair of inverted repeats (IR) regions of 20,064 bp, each. The genome contains 126 genes, including 82 protein-coding genes, 8 ribosomal RNA genes, and 36 transfer RNA genes. The further phylogenomic analysis showed that L. cubeba and Litsea garrettii clustered in a clade in Lauraceae family. Taylor & Francis 2020-05-27 /pmc/articles/PMC7510600/ /pubmed/33366967 http://dx.doi.org/10.1080/23802359.2020.1768961 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Qinghua
Wang, Huangyijun
Li, Yunqin
Yuan, Xiaolong
Luo, Ting
Wang, Yi
The complete chloroplast genome sequence of Litsea cubeba
title The complete chloroplast genome sequence of Litsea cubeba
title_full The complete chloroplast genome sequence of Litsea cubeba
title_fullStr The complete chloroplast genome sequence of Litsea cubeba
title_full_unstemmed The complete chloroplast genome sequence of Litsea cubeba
title_short The complete chloroplast genome sequence of Litsea cubeba
title_sort complete chloroplast genome sequence of litsea cubeba
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510600/
https://www.ncbi.nlm.nih.gov/pubmed/33366967
http://dx.doi.org/10.1080/23802359.2020.1768961
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