The complete chloroplast genome sequence of Clematis Montana Buch.-Ham. (Ranunculaceae) and its phylogenetic analysis

Clematis montana is a medicinal plant commonly used in southwest of China. The complete chloroplast (cp) genome sequence of C. montana was sequenced using the Illumina Hiseq 4000 platform. The cp genome of C. montana was 159,523 bp in length with 37.98% overall GC content. This circular molecule had...

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Autores principales: Mao, Chaoyi, Zhang, Xueting, Shi, Jia, Chen, Sha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510611/
https://www.ncbi.nlm.nih.gov/pubmed/33366992
http://dx.doi.org/10.1080/23802359.2020.1771225
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author Mao, Chaoyi
Zhang, Xueting
Shi, Jia
Chen, Sha
author_facet Mao, Chaoyi
Zhang, Xueting
Shi, Jia
Chen, Sha
author_sort Mao, Chaoyi
collection PubMed
description Clematis montana is a medicinal plant commonly used in southwest of China. The complete chloroplast (cp) genome sequence of C. montana was sequenced using the Illumina Hiseq 4000 platform. The cp genome of C. montana was 159,523 bp in length with 37.98% overall GC content. This circular molecule had a typical quadripartite structure containing a large single-copy (LSC) region of 79,385 bp, a small single-copy (SSC) region of 18,092 bp, and two inverted repeat (IR) regions of 31,023 bp. The cp genome contained 135 genes, including 91 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on whole cp genome sequences showed that C. montana was closest to C. alternata.
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spelling pubmed-75106112020-12-22 The complete chloroplast genome sequence of Clematis Montana Buch.-Ham. (Ranunculaceae) and its phylogenetic analysis Mao, Chaoyi Zhang, Xueting Shi, Jia Chen, Sha Mitochondrial DNA B Resour Mitogenome Announcement Clematis montana is a medicinal plant commonly used in southwest of China. The complete chloroplast (cp) genome sequence of C. montana was sequenced using the Illumina Hiseq 4000 platform. The cp genome of C. montana was 159,523 bp in length with 37.98% overall GC content. This circular molecule had a typical quadripartite structure containing a large single-copy (LSC) region of 79,385 bp, a small single-copy (SSC) region of 18,092 bp, and two inverted repeat (IR) regions of 31,023 bp. The cp genome contained 135 genes, including 91 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on whole cp genome sequences showed that C. montana was closest to C. alternata. Taylor & Francis 2020-06-01 /pmc/articles/PMC7510611/ /pubmed/33366992 http://dx.doi.org/10.1080/23802359.2020.1771225 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Mao, Chaoyi
Zhang, Xueting
Shi, Jia
Chen, Sha
The complete chloroplast genome sequence of Clematis Montana Buch.-Ham. (Ranunculaceae) and its phylogenetic analysis
title The complete chloroplast genome sequence of Clematis Montana Buch.-Ham. (Ranunculaceae) and its phylogenetic analysis
title_full The complete chloroplast genome sequence of Clematis Montana Buch.-Ham. (Ranunculaceae) and its phylogenetic analysis
title_fullStr The complete chloroplast genome sequence of Clematis Montana Buch.-Ham. (Ranunculaceae) and its phylogenetic analysis
title_full_unstemmed The complete chloroplast genome sequence of Clematis Montana Buch.-Ham. (Ranunculaceae) and its phylogenetic analysis
title_short The complete chloroplast genome sequence of Clematis Montana Buch.-Ham. (Ranunculaceae) and its phylogenetic analysis
title_sort complete chloroplast genome sequence of clematis montana buch.-ham. (ranunculaceae) and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510611/
https://www.ncbi.nlm.nih.gov/pubmed/33366992
http://dx.doi.org/10.1080/23802359.2020.1771225
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