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Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae)
The complete mitochondrial genome was sequenced from the marine water flea Diaphanosoma celebensis. The sequenced mitochondrial genome size was 17,060 bp, possessing identical gene order of 13 protein-coding genes (PGCs) to those of the congeneric freshwater species Diaphanosoma dubium in the genus...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510615/ https://www.ncbi.nlm.nih.gov/pubmed/33366996 http://dx.doi.org/10.1080/23802359.2020.1772138 |
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author | Choi, Beom-Soon Lee, Young Hwan Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong |
author_facet | Choi, Beom-Soon Lee, Young Hwan Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong |
author_sort | Choi, Beom-Soon |
collection | PubMed |
description | The complete mitochondrial genome was sequenced from the marine water flea Diaphanosoma celebensis. The sequenced mitochondrial genome size was 17,060 bp, possessing identical gene order of 13 protein-coding genes (PGCs) to those of the congeneric freshwater species Diaphanosoma dubium in the genus Diaphanosoma. The mitochondrial genome of D. celebensis had 13 PGCs, two rRNAs, and 22 tRNAs. Of 13 PGCs, three genes (CO3, ND3, and ND4) had incomplete stop codons. Furthermore, the stop codons of the remaining ten PGCs were TAA (for CO1, ATP8, ATP6, ND5, ND6, and ND1) and TAG (for NL4L, Cytb, and ND2). The second and third base composition of codon on 9 PCGs on the L strand in D. celebensis mitogenome showed an anti-G bias (11.0% and 15.0%), respectively. |
format | Online Article Text |
id | pubmed-7510615 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-75106152020-12-22 Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae) Choi, Beom-Soon Lee, Young Hwan Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome was sequenced from the marine water flea Diaphanosoma celebensis. The sequenced mitochondrial genome size was 17,060 bp, possessing identical gene order of 13 protein-coding genes (PGCs) to those of the congeneric freshwater species Diaphanosoma dubium in the genus Diaphanosoma. The mitochondrial genome of D. celebensis had 13 PGCs, two rRNAs, and 22 tRNAs. Of 13 PGCs, three genes (CO3, ND3, and ND4) had incomplete stop codons. Furthermore, the stop codons of the remaining ten PGCs were TAA (for CO1, ATP8, ATP6, ND5, ND6, and ND1) and TAG (for NL4L, Cytb, and ND2). The second and third base composition of codon on 9 PCGs on the L strand in D. celebensis mitogenome showed an anti-G bias (11.0% and 15.0%), respectively. Taylor & Francis 2020-06-01 /pmc/articles/PMC7510615/ /pubmed/33366996 http://dx.doi.org/10.1080/23802359.2020.1772138 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Choi, Beom-Soon Lee, Young Hwan Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae) |
title | Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae) |
title_full | Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae) |
title_fullStr | Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae) |
title_full_unstemmed | Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae) |
title_short | Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae) |
title_sort | complete mitochondrial dna of the marine water flea diaphanosoma celebensis (cladocera, sididae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510615/ https://www.ncbi.nlm.nih.gov/pubmed/33366996 http://dx.doi.org/10.1080/23802359.2020.1772138 |
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