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Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae)

The complete mitochondrial genome was sequenced from the marine water flea Diaphanosoma celebensis. The sequenced mitochondrial genome size was 17,060 bp, possessing identical gene order of 13 protein-coding genes (PGCs) to those of the congeneric freshwater species Diaphanosoma dubium in the genus...

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Autores principales: Choi, Beom-Soon, Lee, Young Hwan, Kim, Hee-Jin, Hagiwara, Atsushi, Lee, Jae-Seong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510615/
https://www.ncbi.nlm.nih.gov/pubmed/33366996
http://dx.doi.org/10.1080/23802359.2020.1772138
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author Choi, Beom-Soon
Lee, Young Hwan
Kim, Hee-Jin
Hagiwara, Atsushi
Lee, Jae-Seong
author_facet Choi, Beom-Soon
Lee, Young Hwan
Kim, Hee-Jin
Hagiwara, Atsushi
Lee, Jae-Seong
author_sort Choi, Beom-Soon
collection PubMed
description The complete mitochondrial genome was sequenced from the marine water flea Diaphanosoma celebensis. The sequenced mitochondrial genome size was 17,060 bp, possessing identical gene order of 13 protein-coding genes (PGCs) to those of the congeneric freshwater species Diaphanosoma dubium in the genus Diaphanosoma. The mitochondrial genome of D. celebensis had 13 PGCs, two rRNAs, and 22 tRNAs. Of 13 PGCs, three genes (CO3, ND3, and ND4) had incomplete stop codons. Furthermore, the stop codons of the remaining ten PGCs were TAA (for CO1, ATP8, ATP6, ND5, ND6, and ND1) and TAG (for NL4L, Cytb, and ND2). The second and third base composition of codon on 9 PCGs on the L strand in D. celebensis mitogenome showed an anti-G bias (11.0% and 15.0%), respectively.
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spelling pubmed-75106152020-12-22 Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae) Choi, Beom-Soon Lee, Young Hwan Kim, Hee-Jin Hagiwara, Atsushi Lee, Jae-Seong Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome was sequenced from the marine water flea Diaphanosoma celebensis. The sequenced mitochondrial genome size was 17,060 bp, possessing identical gene order of 13 protein-coding genes (PGCs) to those of the congeneric freshwater species Diaphanosoma dubium in the genus Diaphanosoma. The mitochondrial genome of D. celebensis had 13 PGCs, two rRNAs, and 22 tRNAs. Of 13 PGCs, three genes (CO3, ND3, and ND4) had incomplete stop codons. Furthermore, the stop codons of the remaining ten PGCs were TAA (for CO1, ATP8, ATP6, ND5, ND6, and ND1) and TAG (for NL4L, Cytb, and ND2). The second and third base composition of codon on 9 PCGs on the L strand in D. celebensis mitogenome showed an anti-G bias (11.0% and 15.0%), respectively. Taylor & Francis 2020-06-01 /pmc/articles/PMC7510615/ /pubmed/33366996 http://dx.doi.org/10.1080/23802359.2020.1772138 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Choi, Beom-Soon
Lee, Young Hwan
Kim, Hee-Jin
Hagiwara, Atsushi
Lee, Jae-Seong
Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae)
title Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae)
title_full Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae)
title_fullStr Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae)
title_full_unstemmed Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae)
title_short Complete mitochondrial DNA of the marine water flea Diaphanosoma celebensis (Cladocera, Sididae)
title_sort complete mitochondrial dna of the marine water flea diaphanosoma celebensis (cladocera, sididae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510615/
https://www.ncbi.nlm.nih.gov/pubmed/33366996
http://dx.doi.org/10.1080/23802359.2020.1772138
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