Cargando…
The complete mitochondrial genome of a walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae)
The walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae), is an important agricultural pest and distributed widely in China. The complete mitochondrial genome of A. juglans is 15,638 bp long, and consists of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 21 transfer RNA (tRNA)...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510617/ https://www.ncbi.nlm.nih.gov/pubmed/33365406 http://dx.doi.org/10.1080/23802359.2018.1535854 |
_version_ | 1783585826562637824 |
---|---|
author | Xu, Kangkang Chen, Xiaoyulong Xu, Lin Yang, Wenjia Wang, Yawei Li, Can |
author_facet | Xu, Kangkang Chen, Xiaoyulong Xu, Lin Yang, Wenjia Wang, Yawei Li, Can |
author_sort | Xu, Kangkang |
collection | PubMed |
description | The walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae), is an important agricultural pest and distributed widely in China. The complete mitochondrial genome of A. juglans is 15,638 bp long, and consists of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 21 transfer RNA (tRNA) genes and a putative control region (GenBank accession No. MH819192). The trnI gene has not been observed in the A. juglans mitogenome. The nucleotide composition is significantly biased (A, G, C, and T was 38.35%, 10.02%, 14.96%, and 36.67%, respectively) with A + T contents of 75.02%. All of the 21 tRNAs have the typical cloverleaf structure, with an exception for trnS(1)(AGN). All PCGs are initiated by ATN codons, except for cox1 with AAT instead. Ten PCGs use a common stop codon of TAA or TAG, whereas the remaining three were terminated with a single T. The phylogenetic relationships based on neighbour-joining method showed that A. juglans is closely related to Naupactus xanthographus, which is in accordance with the traditional morphological classification. |
format | Online Article Text |
id | pubmed-7510617 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-75106172020-12-22 The complete mitochondrial genome of a walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae) Xu, Kangkang Chen, Xiaoyulong Xu, Lin Yang, Wenjia Wang, Yawei Li, Can Mitochondrial DNA B Resour Mitogenome Announcement The walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae), is an important agricultural pest and distributed widely in China. The complete mitochondrial genome of A. juglans is 15,638 bp long, and consists of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 21 transfer RNA (tRNA) genes and a putative control region (GenBank accession No. MH819192). The trnI gene has not been observed in the A. juglans mitogenome. The nucleotide composition is significantly biased (A, G, C, and T was 38.35%, 10.02%, 14.96%, and 36.67%, respectively) with A + T contents of 75.02%. All of the 21 tRNAs have the typical cloverleaf structure, with an exception for trnS(1)(AGN). All PCGs are initiated by ATN codons, except for cox1 with AAT instead. Ten PCGs use a common stop codon of TAA or TAG, whereas the remaining three were terminated with a single T. The phylogenetic relationships based on neighbour-joining method showed that A. juglans is closely related to Naupactus xanthographus, which is in accordance with the traditional morphological classification. Taylor & Francis 2018-11-25 /pmc/articles/PMC7510617/ /pubmed/33365406 http://dx.doi.org/10.1080/23802359.2018.1535854 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Xu, Kangkang Chen, Xiaoyulong Xu, Lin Yang, Wenjia Wang, Yawei Li, Can The complete mitochondrial genome of a walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae) |
title | The complete mitochondrial genome of a walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae) |
title_full | The complete mitochondrial genome of a walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae) |
title_fullStr | The complete mitochondrial genome of a walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae) |
title_full_unstemmed | The complete mitochondrial genome of a walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae) |
title_short | The complete mitochondrial genome of a walnut weevil, Alcidodes juglans Chao (Coleoptera: Curculionidae) |
title_sort | complete mitochondrial genome of a walnut weevil, alcidodes juglans chao (coleoptera: curculionidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510617/ https://www.ncbi.nlm.nih.gov/pubmed/33365406 http://dx.doi.org/10.1080/23802359.2018.1535854 |
work_keys_str_mv | AT xukangkang thecompletemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT chenxiaoyulong thecompletemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT xulin thecompletemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT yangwenjia thecompletemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT wangyawei thecompletemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT lican thecompletemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT xukangkang completemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT chenxiaoyulong completemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT xulin completemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT yangwenjia completemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT wangyawei completemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae AT lican completemitochondrialgenomeofawalnutweevilalcidodesjuglanschaocoleopteracurculionidae |