The complete chloroplast genome of Azara serrata (Salicaceae) from Chile

The chloroplast (cp) genome sequence of Azara serrata has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,306 bp in length, containing a large single copy region (LSC) of 85,059 bp and a small single copy region (SSC) of 17,889 bp, which were separated by a pair...

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Detalles Bibliográficos
Autores principales: Su, Min, Kang, Minghui, Li, Mengmeng, Wang, Deyan, Xu, Xiaoting
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510643/
https://www.ncbi.nlm.nih.gov/pubmed/33365399
http://dx.doi.org/10.1080/23802359.2018.1535845
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author Su, Min
Kang, Minghui
Li, Mengmeng
Wang, Deyan
Xu, Xiaoting
author_facet Su, Min
Kang, Minghui
Li, Mengmeng
Wang, Deyan
Xu, Xiaoting
author_sort Su, Min
collection PubMed
description The chloroplast (cp) genome sequence of Azara serrata has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,306 bp in length, containing a large single copy region (LSC) of 85,059 bp and a small single copy region (SSC) of 17,889 bp, which were separated by a pair of 27,679 bp inverted repeat regions (IRs). The genome contained 129 genes, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The overall GC content is 36.5%, while the corresponding values of the LSC, SSC, and IR regions are 34.3, 30.0, and 42.0%, respectively. Further, phylogenetic analysis suggested that the A. serrata is a sister of Flacourtia indica and is an outgroup to the remaining genera of Saliaceae.
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spelling pubmed-75106432020-12-22 The complete chloroplast genome of Azara serrata (Salicaceae) from Chile Su, Min Kang, Minghui Li, Mengmeng Wang, Deyan Xu, Xiaoting Mitochondrial DNA B Resour Mitogenome Announcement The chloroplast (cp) genome sequence of Azara serrata has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,306 bp in length, containing a large single copy region (LSC) of 85,059 bp and a small single copy region (SSC) of 17,889 bp, which were separated by a pair of 27,679 bp inverted repeat regions (IRs). The genome contained 129 genes, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The overall GC content is 36.5%, while the corresponding values of the LSC, SSC, and IR regions are 34.3, 30.0, and 42.0%, respectively. Further, phylogenetic analysis suggested that the A. serrata is a sister of Flacourtia indica and is an outgroup to the remaining genera of Saliaceae. Taylor & Francis 2018-11-21 /pmc/articles/PMC7510643/ /pubmed/33365399 http://dx.doi.org/10.1080/23802359.2018.1535845 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Su, Min
Kang, Minghui
Li, Mengmeng
Wang, Deyan
Xu, Xiaoting
The complete chloroplast genome of Azara serrata (Salicaceae) from Chile
title The complete chloroplast genome of Azara serrata (Salicaceae) from Chile
title_full The complete chloroplast genome of Azara serrata (Salicaceae) from Chile
title_fullStr The complete chloroplast genome of Azara serrata (Salicaceae) from Chile
title_full_unstemmed The complete chloroplast genome of Azara serrata (Salicaceae) from Chile
title_short The complete chloroplast genome of Azara serrata (Salicaceae) from Chile
title_sort complete chloroplast genome of azara serrata (salicaceae) from chile
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510643/
https://www.ncbi.nlm.nih.gov/pubmed/33365399
http://dx.doi.org/10.1080/23802359.2018.1535845
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