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The complete chloroplast genome of Toxicodendron griffithii

The whole chloroplast (cp) genome sequence of Toxicodendron griffithii has been characterized from Illumina pair-end sequencing. The complete cp genome was 159,613 bp in length, containing a large single-copy region (LSC) of 87,722 bp and a small single-copy region (SSC) of 18,911 bp, which were sep...

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Autores principales: Li, Yongjie, Tang, Yiyun, Wu, Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510646/
https://www.ncbi.nlm.nih.gov/pubmed/33366976
http://dx.doi.org/10.1080/23802359.2020.1768931
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author Li, Yongjie
Tang, Yiyun
Wu, Tao
author_facet Li, Yongjie
Tang, Yiyun
Wu, Tao
author_sort Li, Yongjie
collection PubMed
description The whole chloroplast (cp) genome sequence of Toxicodendron griffithii has been characterized from Illumina pair-end sequencing. The complete cp genome was 159,613 bp in length, containing a large single-copy region (LSC) of 87,722 bp and a small single-copy region (SSC) of 18,911 bp, which were separated by a pair of 26,490 bp inverted repeat regions (IRs). The genome contained 132 genes (113 unique), including 87 protein-coding genes (80 unique), 37 tRNA genes (29 unique), and 8 rRNA genes (4 unique). The overall GC content of T. griffithii cp genome is 37.94%. Phylogenetic analysis of 14 chloroplast genomes within the family Anacardiaceae suggests that T. griffithii is closely related to genus Rhus and genus Pistacia.
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spelling pubmed-75106462020-12-22 The complete chloroplast genome of Toxicodendron griffithii Li, Yongjie Tang, Yiyun Wu, Tao Mitochondrial DNA B Resour Mitogenome Announcement The whole chloroplast (cp) genome sequence of Toxicodendron griffithii has been characterized from Illumina pair-end sequencing. The complete cp genome was 159,613 bp in length, containing a large single-copy region (LSC) of 87,722 bp and a small single-copy region (SSC) of 18,911 bp, which were separated by a pair of 26,490 bp inverted repeat regions (IRs). The genome contained 132 genes (113 unique), including 87 protein-coding genes (80 unique), 37 tRNA genes (29 unique), and 8 rRNA genes (4 unique). The overall GC content of T. griffithii cp genome is 37.94%. Phylogenetic analysis of 14 chloroplast genomes within the family Anacardiaceae suggests that T. griffithii is closely related to genus Rhus and genus Pistacia. Taylor & Francis 2020-05-28 /pmc/articles/PMC7510646/ /pubmed/33366976 http://dx.doi.org/10.1080/23802359.2020.1768931 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Yongjie
Tang, Yiyun
Wu, Tao
The complete chloroplast genome of Toxicodendron griffithii
title The complete chloroplast genome of Toxicodendron griffithii
title_full The complete chloroplast genome of Toxicodendron griffithii
title_fullStr The complete chloroplast genome of Toxicodendron griffithii
title_full_unstemmed The complete chloroplast genome of Toxicodendron griffithii
title_short The complete chloroplast genome of Toxicodendron griffithii
title_sort complete chloroplast genome of toxicodendron griffithii
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510646/
https://www.ncbi.nlm.nih.gov/pubmed/33366976
http://dx.doi.org/10.1080/23802359.2020.1768931
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