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The complete chloroplast genome of Toxicodendron griffithii
The whole chloroplast (cp) genome sequence of Toxicodendron griffithii has been characterized from Illumina pair-end sequencing. The complete cp genome was 159,613 bp in length, containing a large single-copy region (LSC) of 87,722 bp and a small single-copy region (SSC) of 18,911 bp, which were sep...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510646/ https://www.ncbi.nlm.nih.gov/pubmed/33366976 http://dx.doi.org/10.1080/23802359.2020.1768931 |
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author | Li, Yongjie Tang, Yiyun Wu, Tao |
author_facet | Li, Yongjie Tang, Yiyun Wu, Tao |
author_sort | Li, Yongjie |
collection | PubMed |
description | The whole chloroplast (cp) genome sequence of Toxicodendron griffithii has been characterized from Illumina pair-end sequencing. The complete cp genome was 159,613 bp in length, containing a large single-copy region (LSC) of 87,722 bp and a small single-copy region (SSC) of 18,911 bp, which were separated by a pair of 26,490 bp inverted repeat regions (IRs). The genome contained 132 genes (113 unique), including 87 protein-coding genes (80 unique), 37 tRNA genes (29 unique), and 8 rRNA genes (4 unique). The overall GC content of T. griffithii cp genome is 37.94%. Phylogenetic analysis of 14 chloroplast genomes within the family Anacardiaceae suggests that T. griffithii is closely related to genus Rhus and genus Pistacia. |
format | Online Article Text |
id | pubmed-7510646 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-75106462020-12-22 The complete chloroplast genome of Toxicodendron griffithii Li, Yongjie Tang, Yiyun Wu, Tao Mitochondrial DNA B Resour Mitogenome Announcement The whole chloroplast (cp) genome sequence of Toxicodendron griffithii has been characterized from Illumina pair-end sequencing. The complete cp genome was 159,613 bp in length, containing a large single-copy region (LSC) of 87,722 bp and a small single-copy region (SSC) of 18,911 bp, which were separated by a pair of 26,490 bp inverted repeat regions (IRs). The genome contained 132 genes (113 unique), including 87 protein-coding genes (80 unique), 37 tRNA genes (29 unique), and 8 rRNA genes (4 unique). The overall GC content of T. griffithii cp genome is 37.94%. Phylogenetic analysis of 14 chloroplast genomes within the family Anacardiaceae suggests that T. griffithii is closely related to genus Rhus and genus Pistacia. Taylor & Francis 2020-05-28 /pmc/articles/PMC7510646/ /pubmed/33366976 http://dx.doi.org/10.1080/23802359.2020.1768931 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Yongjie Tang, Yiyun Wu, Tao The complete chloroplast genome of Toxicodendron griffithii |
title | The complete chloroplast genome of Toxicodendron griffithii |
title_full | The complete chloroplast genome of Toxicodendron griffithii |
title_fullStr | The complete chloroplast genome of Toxicodendron griffithii |
title_full_unstemmed | The complete chloroplast genome of Toxicodendron griffithii |
title_short | The complete chloroplast genome of Toxicodendron griffithii |
title_sort | complete chloroplast genome of toxicodendron griffithii |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510646/ https://www.ncbi.nlm.nih.gov/pubmed/33366976 http://dx.doi.org/10.1080/23802359.2020.1768931 |
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