The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae)

Bixa orellana is a small tree known for its red, oil-soluble pigment contained in the seed coat that is used as a natural dye and food coloring. In this study, we assembled and characterized the complete chloroplast genome of B. orellana as a resource for future genetic studies. With a total length...

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Autores principales: Dai, Seping, Li, Xuwen, Ni, Jianzhong, Ruan, Lin, Zhou, Renchao, Ng, Wei Lun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510647/
https://www.ncbi.nlm.nih.gov/pubmed/33365401
http://dx.doi.org/10.1080/23802359.2018.1535847
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author Dai, Seping
Li, Xuwen
Ni, Jianzhong
Ruan, Lin
Zhou, Renchao
Ng, Wei Lun
author_facet Dai, Seping
Li, Xuwen
Ni, Jianzhong
Ruan, Lin
Zhou, Renchao
Ng, Wei Lun
author_sort Dai, Seping
collection PubMed
description Bixa orellana is a small tree known for its red, oil-soluble pigment contained in the seed coat that is used as a natural dye and food coloring. In this study, we assembled and characterized the complete chloroplast genome of B. orellana as a resource for future genetic studies. With a total length of 159,825 bp, the chloroplast genome comprised of a large single-copy (LSC) region of 89,476 bp, a small single-copy (SSC) region of 19,617 bp, and two inverted repeat (IR) regions of 25,356 bp each. A total of 127 genes were predicted, consisting of 83 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis confirmed the position of B. orellana within the order Malvales.
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spelling pubmed-75106472020-12-22 The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae) Dai, Seping Li, Xuwen Ni, Jianzhong Ruan, Lin Zhou, Renchao Ng, Wei Lun Mitochondrial DNA B Resour Mitogenome Announcement Bixa orellana is a small tree known for its red, oil-soluble pigment contained in the seed coat that is used as a natural dye and food coloring. In this study, we assembled and characterized the complete chloroplast genome of B. orellana as a resource for future genetic studies. With a total length of 159,825 bp, the chloroplast genome comprised of a large single-copy (LSC) region of 89,476 bp, a small single-copy (SSC) region of 19,617 bp, and two inverted repeat (IR) regions of 25,356 bp each. A total of 127 genes were predicted, consisting of 83 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis confirmed the position of B. orellana within the order Malvales. Taylor & Francis 2018-11-21 /pmc/articles/PMC7510647/ /pubmed/33365401 http://dx.doi.org/10.1080/23802359.2018.1535847 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Dai, Seping
Li, Xuwen
Ni, Jianzhong
Ruan, Lin
Zhou, Renchao
Ng, Wei Lun
The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae)
title The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae)
title_full The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae)
title_fullStr The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae)
title_full_unstemmed The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae)
title_short The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae)
title_sort complete chloroplast genome of the lipstick tree, bixa orellana (bixaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7510647/
https://www.ncbi.nlm.nih.gov/pubmed/33365401
http://dx.doi.org/10.1080/23802359.2018.1535847
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